Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01755 ATGGCATCGTCTTCCCCAAAGGAGCAATCGAGGGACGAGGATCGGGAAGAGGAACAGCAACAGCCGCAGCAGGCAGTGAAAGAGTGCGTCCACAAAACCAAAACGATTCAGTTTCTTGGACGCACCACTCCGATCGTTCTTCAAAACGACAATGGACCTTGCCCGCTCCTCGCTATCTGTAACGTTCTTCTGTTAAGAAACAACTTAAATCTGAGTCCAGATATTGCTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGAACGATTAATTGATTCAAATAGTAACGTGAATAACAAAGATGCAGGTTATGTTGAAAATCAACAACAGAACATTGCTGATGCAATTGACTTGCTTCCTAGGCTTGCTACTGGCATTGATGTAAATATAAAATTTAGGAGAATAGATGATTTTGAATTCACTCGAGAGTGTGCAATATTTGATCTGCTGGACATCCCTTTGTATCATGGCTGGATTGTTGATCCTCAGGATTATGACACTGCAAATGCAATTGGATCAAAGTCCTATAATGCCCTTACGGGGGAGCTTGTCTCTCTTGATACACTTAACATGGAAGTCCATCATAAAAATAATCCAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTACACTTGGAGTTCCTTCTCCCAGTCTTTCAAAGGCCAGGTCTTTTGATGATTCGTCTCATTGTGTTGATTTCTCTAATACTGATCATATCCCAAGGAAAGGTGATCTTGAAGAAGAGGCAGAGTTGTTGAGAGTTTTGAAACTGTCTGAGGATGATTCTACAGCTTCAGTAAGTGATCCTGTTGTAGGTCATGTAAATGGAGGAGAAATTTCTGTCAGTGTGGATAGAAATATGTGTAACGAGCAGGTTATGAATATGGATTCGGGAGATAAATTAGGGAATAGCACTGGCGCTGGTAACAGTGTCATTCATGACCCAGAGCCTTCCATATCTGATGATTGCACTGCTTCTGGCAAAGACCACAATGAACAGATATCTTATTCTTCTACATTGGGAGAGGCAGCTAATCCATCCTTAAAGACTGATACCATAAGTGACCATCAATTAGCTTATACGGGACCTGAAGAATCTTTTGACCTGAATAATGTGATTGAGAAGAACAGCCTTGATGCATTGGTCCAGAATGAGAATGAAGTTATCCCTTCTCCTGAAAAACACCCTATCTCTTTGTTTGAGTGCCATGCAGATGTTTCTGGAGGAGATGGAAAAGTCCATGATCAGTCCATTCCTACAACTATAGATCATGAAGTTATAGGTGAATCTCATGGACCTGATGCCACAGGATTATCATTCTCATCCCCAGGTCATACAAATTCAGATTCATCTAGTGTCAAATATAATCAAACTGATGTTTCGGGAGCATTGACTTCAAGTGTTAATGGGAGTGAGCCCATATATGAAGGAGAAGAATGTGTGTTGGATACAAGAACCGGAAATTTTGAGGATCGTGAACCTATTTATGAAGGTGAGGTGGTACTTGCAGAACAGGCTGACAAAAGCACCTTAGCTGCTCCTGATCTAAGAGCTAAGGATGAACTTACCCCAGAACAAGGTGAATTGATCAAAAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGCCTTTTCTGTTTACAAGATGGGCTCAAAGAGCGTGAGCTGTGTGTTTTTTTCCGTAACAATCATTTCAGCACCATGTTCAAGTTTGAGGGTGAGCTCTATCTTCTGGCCACGGACCAAGGTTACATAAATCAGCCTGATCTGGTCTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACCAGTAACTTCAAGGAATTCAAGGTAGAAAGCCATGAAAATAGCACATGGGATGAGAGCAATGCTCTGACCAGCACTGCTGACTATCTTGCCAGCATAGACAGTGCAGCACAAGCAGGCTTAGATATCAATTCTGATCTGCAATTAGCAATAGCCTTGCAACAACAGGAGTTTGAGCAGCAACCATCGCGCCAGAATAACTCACAGCAATCATCTATTGGTGGTAGCTCTAGACTGGTCACAGGTCCCCAGGTGGCAAGAAACCCTGGAAGACATTCATCTTCATCTACATCATCATCTCCCAGGCCTGATGGAAAATCCAAAGAAAAATGTATAGTGATGTGA 2178 0.4197 MASSSPKEQSRDEDREEEQQQPQQAVKECVHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALTGELVSLDTLNMEVHHKNNPEEDCVDFVAATTATLGVPSPSLSKARSFDDSSHCVDFSNTDHIPRKGDLEEEAELLRVLKLSEDDSTASVSDPVVGHVNGGEISVSVDRNMCNEQVMNMDSGDKLGNSTGAGNSVIHDPEPSISDDCTASGKDHNEQISYSSTLGEAANPSLKTDTISDHQLAYTGPEESFDLNNVIEKNSLDALVQNENEVIPSPEKHPISLFECHADVSGGDGKVHDQSIPTTIDHEVIGESHGPDATGLSFSSPGHTNSDSSSVKYNQTDVSGALTSSVNGSEPIYEGEECVLDTRTGNFEDREPIYEGEVVLAEQADKSTLAAPDLRAKDELTPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSNFKEFKVESHENSTWDESNALTSTADYLASIDSAAQAGLDINSDLQLAIALQQQEFEQQPSRQNNSQQSSIGGSSRLVTGPQVARNPGRHSSSSTSSSPRPDGKSKEKCIVM 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01755 725 PANTHER NF-E2 INDUCIBLE PROTEIN 1 725 IPR007518 GO:0004843|GO:1990380
Cca06g01755 725 MobiDBLite consensus disorder prediction 669 713 - -
Cca06g01755 725 MobiDBLite consensus disorder prediction 439 459 - -
Cca06g01755 725 MobiDBLite consensus disorder prediction 1 26 - -
Cca06g01755 725 MobiDBLite consensus disorder prediction 7 22 - -
Cca06g01755 725 MobiDBLite consensus disorder prediction 430 459 - -
Cca06g01755 725 Pfam MINDY deubiquitinase 60 183 IPR033979 GO:0004843|GO:1990380
Cca06g01755 725 MobiDBLite consensus disorder prediction 669 725 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01755 K01309 - gmx:100808340 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01755 06 32829122 32836009 Cca06g01755 06 32829122 32836009 ECH