Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01753 ATGAATTTTTTATGTTGGGTTTGTCTCTTGGATCAGGTTGCAAGGTTGTTTGGGCCAGCCATATTTGAAGCCTCCAAACTCAAGGTTTTGTTCTTAGGTGTGGATGAAAACAAACACCCAGGAAATCTCCCAAGGACTTATACGCTAACCCATAGTGATATCACCGCTAAGCTCACTTTGGCAATCTCTCAAACCATAAATAACTCTCAGTTGCAGGGGTGGTACAACAGATTGCAAAGGGACGAAGTGGTGGCACAGTGGAAGAAGGTGAAGGGAAAGATGTCTCTGCACGTTCACTGCCACATCAGTGGAGGTCATTTTCTGTTGGACATATTAGCGAGGTTAAGATACTTGATCTTCTACAAAGAGCTACCCGTGGTTCTGAAGGCGTTCGTTCACGGTGATGGCAACCTTTTCAACAAGTACCCGGAACTGCAAGAGGCCTTGGTTTGGGTTTACTTCCACTCAAACATTGGAGAATTCAACAAGGTGGAGTGTTGGGGCCCACTTAAGGAAGCCTCAGCACCCTCGGGTGGGGCCCAAGAAGAGGGTAAGCAAGAAAGTGAGGCGAGTGAGGAAGGGTTGgccaatgcaaatgccaatgccaatgccaatgccaatgccattgccaTACCGCAACCATGCCATGAGGAATGTGAATGTTGCTTTCCCCCACTCACGTTAACAGCAATTCAGTGGTCTCAAGAACCTCCCACTCCCACTCCCCGTTACGATGGAATTGGGACCCAACAAAATCTATAA 762 0.4449 MNFLCWVCLLDQVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDILARLRYLIFYKELPVVLKAFVHGDGNLFNKYPELQEALVWVYFHSNIGEFNKVECWGPLKEASAPSGGAQEEGKQESEASEEGLANANANANANANAIAIPQPCHEECECCFPPLTLTAIQWSQEPPTPTPRYDGIGTQQNL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01753 253 MobiDBLite consensus disorder prediction 174 194 - -
Cca06g01753 253 Pfam Staygreen protein 22 173 IPR024438 -
Cca06g01753 253 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 12 238 - -
Cca06g01753 253 MobiDBLite consensus disorder prediction 233 253 - -
Cca06g01753 253 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 12 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01753 Cca-Chr6 32813490 32815810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01753 K22013 - gmx:732541 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01753 06 32813490 32815810 Cca06g01753 06 32813490 32815810 ECH