Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01745 atgatgatgatgatgatggaagaggaagatatgGAAATAGAGCACCAAGTCTTCGTTGCTCACCAGATTGACTTCGATTACGAGTTCGACGCAGTTCGATTCTTCGATTTCAGTGCACAAGAATCTCCTGCTCAAGCTCGCCAAGCCGAACTATGGTTTCAATCCGCCGGAAGCTACCCTCCTTCTCCTTTTGTGGCGAAGCTTGTGGTGAGAGACGACGACGTTTGCACCTATCCAGAATCAGACCGCACCGTTTCCCGCACCGTCTTTCACCATGGCGGTTCAAAAGGAGAGGGTGGTAACACTTCTGCTTTCCTTGGCGGAGTTTCTAGGGATGTTAATATGCAACTGTTGCAAGTAACTACAGGACTGACCTTTAGCAGTAAGGCAAACAGTGGCAATTTGAATTCTAAGGTAAAAACTGCTGTGATGAAGGGTTCAACACTAATGAAACCTACTGCTAGTCAGTTGGCTAAGCAAAATCGGCCCCTCCAAAGTGTTAGCTCAAGGTTTCAGAAAGTACAAGATCATAACAGAAAAATAAATTCATCTACCTCTTCTGGGATAGAATGTCAAGCTGCCAAACGACAGAAATTAGAAGGCGGTCTATTGCAAAAGGTTGGTGACGTGAAGCAGCAAGTTAATTTTGTCCACAAGACACCTAAGAAGGTTGCAACTGTTGATCAAAATTCTGGACATTCAAAGCTTAAGATTACTATTCCTAGAGAGCCTGATTTAGAAACAGCTCACAGAGCACAAAGGATTAGACCAAAAACTGCTGCAGAGGCAGAAGTTGTGACAGTGCCAGTGGCTGTCCCCAGATTCAAAGCACGCCCATTAAATAGAAAAATTCTGAATGCTCCTTCATTACCACTTCCCAAGAGGAGCACGCCACGGTTGCCAGAATTTCAAGAATTTCATCTTAAGACACAAGAGAGGGCCATGCAGCATACATCTACATCTACGACTTCATCATCTTCACTTCACTGCAATGATTCTAATAAGGATTTGGACAAACATACTGCTGTTACTGCTCAAGAATATAAAATCAGGGATTTGAGAAGACCGTCTGCCATGGGTGCTCCAAAGCATGATGGATTGGATTTTGCACATAGTTTTAAAGCTCGGCCTCTCAATAAGAAGATTCTTTCAAGTAAAGGAGATATTGGTGTTTTCCGGAACAGAAAGCAGGAAACCACTGTGCCTATGGAATTTAATTTTCATACGGAAAAGAGGATTCAGCATAACCCACCAATTGAACTCTTTAGCAAGATGTCCCTAGCATCCGAAGTGCAGTCAAATAACGGATCTCAGTTGAATCTGCCTCGGCATTCCAGATTATTTGTTTCTGGATGCAAGGATTCAAAAGAAAATATAGGAAGTTCTTTTCATCTGGGCGTGAAGGAAATGCCTTTTGTATTTGGGGGAAAGCAAATTCATAGTGGGAGGGACGGCTGCGACAGTGACGCTGGTACTCTGTTGGCTGCAAGGAGGAGCTTGGGAATTCGATGA 1512 0.4279 MMMMMMEEEDMEIEHQVFVAHQIDFDYEFDAVRFFDFSAQESPAQARQAELWFQSAGSYPPSPFVAKLVVRDDDVCTYPESDRTVSRTVFHHGGSKGEGGNTSAFLGGVSRDVNMQLLQVTTGLTFSSKANSGNLNSKVKTAVMKGSTLMKPTASQLAKQNRPLQSVSSRFQKVQDHNRKINSSTSSGIECQAAKRQKLEGGLLQKVGDVKQQVNFVHKTPKKVATVDQNSGHSKLKITIPREPDLETAHRAQRIRPKTAAEAEVVTVPVAVPRFKARPLNRKILNAPSLPLPKRSTPRLPEFQEFHLKTQERAMQHTSTSTTSSSSLHCNDSNKDLDKHTAVTAQEYKIRDLRRPSAMGAPKHDGLDFAHSFKARPLNKKILSSKGDIGVFRNRKQETTVPMEFNFHTEKRIQHNPPIELFSKMSLASEVQSNNGSQLNLPRHSRLFVSGCKDSKENIGSSFHLGVKEMPFVFGGKQIHSGRDGCDSDAGTLLAARRSLGIR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01745 503 Pfam Cell cycle regulated microtubule associated protein 236 407 IPR027330 -
Cca06g01745 503 PANTHER TARGETING PROTEIN FOR XKLP2 10 500 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Cca06g01745 503 MobiDBLite consensus disorder prediction 313 338 - -
Cca06g01745 503 MobiDBLite consensus disorder prediction 313 331 - -
Cca06g01745 503 PANTHER CELL CYCLE REGULATED MICROTUBULE-ASSOCIATED PROTEIN 10 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01745 Cca-Chr6 32744001 32751509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01745 - - gmx:100806215 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01745 06 32744001 32751509 Cca06g01745 06 32744001 32751509 ECH