Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01742 ATGACGTATTTCGAGGAGGTCGTCATTAACGACGGTGGCCGCACCAGGGACGTCGAGCGCACTCGCGACGGCGGAGAGTACATCAAATTGAGGTGGGACTCACTGCCCGAAGCCACGGCCACCAGCCGGAGAAGATCGTGTCTCTGTTATTGGGTTAAATCCGCCCTGTGCTTAATATGTGTGGCCCTTCTGGCTCTCGCTGCTTTCAAATGGGTTTGCCCCTTCGTTGTAGAAAAGGTGATTATTCCGATTATAACGTGGGAGAGCAACAGATTCAGCTATCCCGTGTTAGCTGTTGTATTGTTTGGTTCTATAGCGCTTTTCCCTACCCTGTTTTTGCCTTCCTCGCCTTCTATGTGGGTGGCTGGGATGAAATTTGGTTATGGCTTTGGATTCTTGCTAATAATTTCTGCAGCACTTGTGGGAGTTTCACTCCCTTTCTTCATCGGTTCAATGTTTCATCGTAAAATTAATGTGTGGTTAGAAAAATATCCAAAGAACGCTTCTGTTCTAAGATCTGCTGGTGAGGGAAATTGGTTTCATCAATTTCGTGCAGTTGCTTTAATCAGGATTTCCCCATTCCCATACATACTGTACAACTATTGTGCCGTGGCAACAAATGTTCATTATTGGCCTTACTTGTGCGGATCCTTGGTAGGAATGGTGCCAGAAATATTTATTTCAATCTATACGGGAATTTTGATAAAAACGTTGGCTAATGCTACACATCAAAAGGATACTATATCTGCTACGCAAATTGTCCTCAATGTTGTTGGTTTCTGCGTAACTGTAGCTACAATAATCTTTTTCACAGTCTATGCTAAGAGGCAGCTCAAGGAGTTACAAAAAGAGGAGGATCTGCTGTTGAAATAA 873 0.4399 MTYFEEVVINDGGRTRDVERTRDGGEYIKLRWDSLPEATATSRRRSCLCYWVKSALCLICVALLALAAFKWVCPFVVEKVIIPIITWESNRFSYPVLAVVLFGSIALFPTLFLPSSPSMWVAGMKFGYGFGFLLIISAALVGVSLPFFIGSMFHRKINVWLEKYPKNASVLRSAGEGNWFHQFRAVALIRISPFPYILYNYCAVATNVHYWPYLCGSLVGMVPEIFISIYTGILIKTLANATHQKDTISATQIVLNVVGFCVTVATIIFFTVYAKRQLKELQKEEDLLLK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01742 290 PANTHER SNARE ASSOCIATED GOLGI FAMILY PROTEIN-RELATED 1 289 - -
Cca06g01742 290 Pfam SNARE associated Golgi protein 113 233 IPR032816 -
Cca06g01742 290 PANTHER EXPRESSED PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01742 Cca-Chr6 32711424 32714257 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01742 - - gmx:100782521 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01742 06 32711424 32714257 Cca06g01742 06 32711424 32714257 ECH