Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01733 ATGGAGTGGCCGACTTGTACGGACGAGTACGAAAAGCTCGTAATACGGATGAGCACTCCCAGGGTAGTCATTGATAATGCCGTTTTTTCCTCAGCTACTCTGATTAAGGTTGACAGTGCCAGAAGGCATGGTATTCTATTGGATGCTGTACAAGTGCTCACTGACCTAAACCTTTCAATTAAGAAGGCATATATTTCTGCTGACGGCAAGTGGTTCATGGATGTTTTCCATGTCACTGATCAAAATGGAAATAAGATAACGGACGAGAGTGTTCTAAAGTACATTGAACAGTCACTTGGGAACATTCACTATGGGAGAACTAACCGCTCTAATGGTCTCACTGTACTGGAATTAACCGGGGCTGACCGGGTCGGTCTTTTATCGGAGGTGTTTGCTGTACTTGCTGATCTTCAATGCGATGTGGTTGAGGCCAAGGTTTGGACTCATAATGGCCGCATCGCCTCTTTAATTTATGTAAAAGACTGCAATTCTGGGTCTTCTATTGAGGACTCTCAGAAAATTAACAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGATATTAGAAGTGCAAAAATTTCTGTCTCTATGGCTGTTATGCATACTGAAAGAAGGCTACATCAAATGATGTTCGCTGACCGTGATTATGAGAGGACTCCCATTCTCAAGTTTACTTCTGATAATCCATTGGTGACTGTTCAGAATTGGACTGGAAGGGGTTATTCAGTTGTGAATGTTCAGTGCAAAGACCGAATCAAGCTATTATTCGACGTTGTATGCAATTTGACAGACATGGAATATGTTGTATTTCATGCAACTATTAACACCGATGGTGACCGAGCCTACTTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAGCCAGAGCGTCAACGTGTAATTCAATGCTTAAAAGCTGCTGTGGAGAGAAGGGCATCTGAGGGTGTTCAACTAGAATTATGCACAGAAGATAGGCAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGAGAAAATGGGCTCAATGTGACGAGGGCTGAGATATCCACTATAGGAAATATGGCTACAAACGTGTTCTATGTGACGGATGCGATTGGAAACCTAGTTGATCCAAAAATCATCGAATCTGTCAGGCAAAAAATTGGATTAAGCAATTTAGAAGTAAAGGAGTTGCAGTTGATAGATCATCAACAGGCAGAGGGAGAAAATCAAGCGGTTGGAATTGGTGGGGCTGTGTTGTTGTCGATTGGGAGCCTTGTGAGAAGGAATCTATACCATTTGGGACTAATCAAATCCTGTTCTTAA 1326 0.4208 MEWPTCTDEYEKLVIRMSTPRVVIDNAVFSSATLIKVDSARRHGILLDAVQVLTDLNLSIKKAYISADGKWFMDVFHVTDQNGNKITDESVLKYIEQSLGNIHYGRTNRSNGLTVLELTGADRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSSIEDSQKINKIELRLRNVLKGDNDIRSAKISVSMAVMHTERRLHQMMFADRDYERTPILKFTSDNPLVTVQNWTGRGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVQLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGNMATNVFYVTDAIGNLVDPKIIESVRQKIGLSNLEVKELQLIDHQQAEGENQAVGIGGAVLLSIGSLVRRNLYHLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01733 441 CDD ACT_ACR_1 32 100 - -
Cca06g01733 441 Gene3D - 113 187 - -
Cca06g01733 441 Gene3D - 322 392 - -
Cca06g01733 441 CDD ACT_ACR_2 114 187 - -
Cca06g01733 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Cca06g01733 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
Cca06g01733 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Cca06g01733 441 Pfam ACT domain 114 168 IPR002912 -
Cca06g01733 441 CDD ACT_ACR_3 244 318 - -
Cca06g01733 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
Cca06g01733 441 CDD ACT_ACR_4 322 393 - -
Cca06g01733 441 SUPERFAMILY ACT-like 244 311 IPR045865 -
Cca06g01733 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Cca06g01733 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Cca06g01733 441 SUPERFAMILY ACT-like 320 393 IPR045865 -
Cca06g01733 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01733 Cca-Chr6 32632380 32635427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01733 - - gmx:100806283 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01733 06 32632380 32635427 Cca06g01733 06 32632380 32635427 ECH