Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01728 ATGAAACTATCTTGGTCACCGGAGAGAGCCTCCAAAGCATACATAGACACAGTCCAATCCTGTGAGGTTTCCCGCGAATCAGGAGTGGCGGAGTTTATTTCGGCGATGGCGGCGGGGTGGAACGCGCAGCTCATAGTGGAGACGTGGTCGCAGGGCGGGGTGATCGCCACCAGCGTCGGTCTAGCAGTGGCCAGGCGCCACACGTGCGGGAGACACGTGTGCGTGGTGGCCGACGAACGCGCCAGGTCCGAGTACGCCGAGCGGATGGGCGAGGCGGGCGTGGCGGCGGAGATCGTGGTGGGGGAAGCGGAGGAGGTGATGGAGGGTCTGGTCGGCGTGGAGTTCTTGGTGGTGGATGGTCGGAGGAAGGATTTTCCGCGCGTGGTGAGGCTGGCCAAGTTGAGTAGTAGGGGCGCGGTGTTGCTGTGCAAGAACGCCACTTCTGCCTCCAAGGCCAAGGGCTTCGTGTGGCGGAGCCTGGTGGCACAAGCGCAAGCTTCCAATTCCCGCCGCCTTCTTCGTTCGGTCTTTCTTCCTGTTGGCAAGGGCCTTGACATGGCGCACGTCTCTGCCTCCTCTCACGGTTGGTATCAACTACTTTGCGGATCTTTCCAGCAAGCTTCATGCACGAGTTCTGCTTCTCGAATGCATTGCATACCCGAGAATTTGTACCTCGGTGCTCGCAGGTCGCAGCACAGAGAAGACACTAGAAGTGAGACTGGGCGTAGTTAG 732 0.6011 MKLSWSPERASKAYIDTVQSCEVSRESGVAEFISAMAAGWNAQLIVETWSQGGVIATSVGLAVARRHTCGRHVCVVADERARSEYAERMGEAGVAAEIVVGEAEEVMEGLVGVEFLVVDGRRKDFPRVVRLAKLSSRGAVLLCKNATSASKAKGFVWRSLVAQAQASNSRRLLRSVFLPVGKGLDMAHVSASSHGWYQLLCGSFQQASCTSSASRMHCIPENLYLGARRSQHREDTRSETGRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01728 243 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 193 - -
Cca06g01728 243 PANTHER DUF1442 FAMILY PROTEIN 1 193 IPR009902 -
Cca06g01728 243 Pfam Protein of unknown function (DUF1442) 1 195 IPR009902 -
Cca06g01728 243 Gene3D Vaccinia Virus protein VP39 8 193 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01728 Cca-Chr6 32576534 32577973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01728 - - gmx:100778228 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01728 06 32576534 32577973 Cca06g01728 06 32576534 32577973 ECH