Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01727 ATGAATCGCGTAGCATTGCCCAAATCCATTGCCCACCGTTTCAGATGGAAGCAATTCAGTAACCGTTGCGAAAGCCAGGTCCAAAGCGCTGGGCCCGTAGCCTCTCTCCTCAAGTCCCGCTCCGTTATACGGTTCCGCGGGCCTGACACCCTCAAGTTCCTCCAGGGCCTGTTGACCAACGATGTATGGAGGTTGGGTGAATCCATTGGTGACAAAACCGAAAACTTGCCCACACCCAACGTCCCTGCCACCTCGGTTCCTCCTATTTATGCTGCGCTGTTGACTCCTCAAGGGAGATTCCTCTACGACCTCCTTCTCTATAAGCCTCCCACGTGCGACACCATGCTCGATCACACTGGCTCTGGCCCTCACTCCCACACCGATCAACCCTTTCATTTGTTTGCTGACGTCGATGCTTCTATCTTGGATGAGTTGTTGCAAACCTTCAACAAATACAGGTTGAGGTCAAAGGTTGAGATTGATGATGTCTCCAGAGATTTCTCGTGCTGGCAGCGATATGGTGCTGGCCTTCCTGAGAAGTCCTCACAAGTAGAAGAACCAGAAGCAGCCTCTGTTGGCTGGGGTGCTGGTTTGGATCGTACTGCAATGTCTTCTTCACATGGGAGTGATCATGGGTGGCAATGGtttaaggatcccagattggtctctcttggttttcgagGAATCTTCCCATCAAATATAACTCCACCTCTAATTGAGGTTGATAAAGAGACTGATGAACAGAATTTCCTTCTATGGAGAATAGAGAAGGGAGTAGCAGAAGGATCAACCGAGATTCCAAAAGGTGAGGCAGTACCGCTTGAGTATAATCTTGCAGGTCTAAATGCAATTAGCTTTGACAAAGGTTGTTATGTCGGTCAAGAACTCATAGCCCGTACCCATCACAGGGGGGTGATTAGAAAGCGGATAATTCCTCTAAGATTTCTCGATAATGATGGGAAAGAGTTAGTAAACAAAGTTGTTCCAGGCTCAGAAGTAATGAACACTGCATCCGGCAAAAAAGCTGGCATAGTGACTACTGCCCTAGGATGTCGTGGGCTGGGGCTCTTGCGACTTGAGGAAGCTTTAAAGGGGTCGAGTGCTTTGTGCATTCAGGGACAAGAGGATGTGAAGGTTGTCGCCAGTAGACCAGATTGGTGGCCTTCTGAATGGCTTCAGGATCATGGACAGCATGCTGCTTTTGCCTAG 1209 0.4773 MNRVALPKSIAHRFRWKQFSNRCESQVQSAGPVASLLKSRSVIRFRGPDTLKFLQGLLTNDVWRLGESIGDKTENLPTPNVPATSVPPIYAALLTPQGRFLYDLLLYKPPTCDTMLDHTGSGPHSHTDQPFHLFADVDASILDELLQTFNKYRLRSKVEIDDVSRDFSCWQRYGAGLPEKSSQVEEPEAASVGWGAGLDRTAMSSSHGSDHGWQWFKDPRLVSLGFRGIFPSNITPPLIEVDKETDEQNFLLWRIEKGVAEGSTEIPKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRIIPLRFLDNDGKELVNKVVPGSEVMNTASGKKAGIVTTALGCRGLGLLRLEEALKGSSALCIQGQEDVKVVASRPDWWPSEWLQDHGQHAAFA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01727 402 Gene3D Probable tRNA modification gtpase trme; domain 1 16 384 IPR027266 GO:0005515
Cca06g01727 402 TIGRFAM ygfZ_signature: folate-binding protein YgfZ 249 314 IPR017703 -
Cca06g01727 402 PANTHER UNCHARACTERIZED 26 390 IPR045179 -
Cca06g01727 402 SUPERFAMILY Folate-binding domain 33 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01727 Cca-Chr6 32569965 32572779 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01727 K22073 - gmx:100804156 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01727 06 32569965 32572779 Cca06g01727 06 32569965 32572779 ECH