Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01712 ATGTCCAGCGCAGTCCCACTCCTCACGGCGCGCCACGTGGCAGTGATCGGCGCCGGCGCCGCCGGTCTGGTGGCGGCGCGGGAGCTCCGGAGAGAGGGGCATGGTGTGGTGGTTTTCGAGCGAGGGGAGCAAGTGGGCGGCACGTGGGTGTACACTCCGGAGGTGGAATCGGATCCGCTAGGTTGGGATCCGAGCCGAAGCATAGTCCACTCGAGCCTGTACGATTCGCTCCGAACCAATCTGCCTCGGGAGTGCATGGGTTTCCGAGATTACCGCTTCGGGAAGAGGAGAGATTCTAGAAGGTTCCCCGGTCACAGAGAGGTGTTGATGTATTTGCAGGATTTCGCTCTTGATTTTGAAATCCTTGAATTGGTGAGGTTTGAAACGGAGGTAGTGTTTGCTGGGTTGGGCGAGGGTGGGAAATGGAGGGTCACATCCAAATCACCACATAGTGATCGTGACTCTGTGGATGAGATTTACGACGCCGTTATCGTTTGCAACGGACACTACGTTCAGCCTCGTCTCCCTCATATCCCCGGCATCAATGCATGGCCAGGGAAGCAAATGCATAGCCACAATTATAGAACACCTGAACCCTTTCAAGATCAAGTTGTAGTTCTAATAGGTAGCTCTGCCAGTGCGGTTGATATATCTCGAGATGTTGCAACAGTTGCTAAAGAAGTCCACATTGCAGCTAGGTCAGTTGAAGAAGATAAGCTAGGCCAGATGCCTGGCCATGAAAACATGTGGCTGCATTCTATGATTGACAGCGTTCATGAAGATGGTACAGTGGTTTTTCAAGATGGAATTGCAGTTCGTGTTGACTTCATCATACATTGCACAGGGTACAAGTATGATTTCCCTTTCCTTGAAACCAATGGGGAGGTGACTGTAGATGACAACCGTGTAGGACCACTCTACAAGCATGTTTTTCCACCAGGGTTGGCTCCATGGCTTTCATTTGTTGGCTTGCCTTGGAAGGTTGTTCCCTTCCCCATGTTCGAACTGCAGAGCAAGTGGATAGCCAGAATTTTGTCTAATCGCATTGCACTTCCTTCAAAAGAGGAGATGGCTGAAGATATTGAAGCATTTTACTCGTCACTTGAAGCCTCTGGCACACCTAAGCGTTACACTCATAATATGGGCATTCTTCAGTGGGACTACAATAACTGGATTGCGGATCAATGTGGGCTTCCTTCTATTGAAGAATGGAGAAAACAAATGTATATGGCTACATCTAAAAACAGGGTCCTACGACCTGAGTCTTACCGTGACGAGTGGGAGGATGATGACTTGATTTTGAAAGCTCAACAGGATTTTGCCAATTATTGA 1332 0.494 MSSAVPLLTARHVAVIGAGAAGLVAARELRREGHGVVVFERGEQVGGTWVYTPEVESDPLGWDPSRSIVHSSLYDSLRTNLPRECMGFRDYRFGKRRDSRRFPGHREVLMYLQDFALDFEILELVRFETEVVFAGLGEGGKWRVTSKSPHSDRDSVDEIYDAVIVCNGHYVQPRLPHIPGINAWPGKQMHSHNYRTPEPFQDQVVVLIGSSASAVDISRDVATVAKEVHIAARSVEEDKLGQMPGHENMWLHSMIDSVHEDGTVVFQDGIAVRVDFIIHCTGYKYDFPFLETNGEVTVDDNRVGPLYKHVFPPGLAPWLSFVGLPWKVVPFPMFELQSKWIARILSNRIALPSKEEMAEDIEAFYSSLEASGTPKRYTHNMGILQWDYNNWIADQCGLPSIEEWRKQMYMATSKNRVLRPESYRDEWEDDDLILKAQQDFANY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 11 27 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 35 59 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 189 203 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 216 231 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 267 294 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PRINTS Flavin-containing monooxygenase (FMO) signature 332 345 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PANTHER DIMETHYLANILINE MONOOXYGENASE 7 443 - -
Cca06g01712 443 SUPERFAMILY FAD/NAD(P)-binding domain 11 237 IPR036188 -
Cca06g01712 443 Pfam Flavin-binding monooxygenase-like 11 234 IPR020946 GO:0004499|GO:0050660|GO:0050661
Cca06g01712 443 Pfam Flavin-binding monooxygenase-like 252 365 IPR020946 GO:0004499|GO:0050660|GO:0050661
Cca06g01712 443 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 7 443 - -
Cca06g01712 443 PIRSF FMO 9 236 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 PIRSF FMO 246 398 IPR000960 GO:0050660|GO:0050661
Cca06g01712 443 SUPERFAMILY FAD/NAD(P)-binding domain 251 431 IPR036188 -
Cca06g01712 443 Gene3D - 177 280 IPR036188 -
Cca06g01712 443 Gene3D - 13 425 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01712 Cca-Chr6 32449950 32452729 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01712 - - gmx:100793203 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01712 06 32449950 32452729 Cca06g01712 06 32449950 32452729 ECH