Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01701 ATGGCGGGAGCTACTGCGTCCTGTGTTTTCTGTGCGATTGCCACCAAATCCACCTCTCTTCTTCATTCCGACGATAAGGTCGTGGCTTTTCAGGACATTAATCCATCTGCATTCAGGCATTACTTGGTAGTTCCTGTGGCGCACATTCCGACTGTTAAAGATCTCCAGAGAAAAACTGATGACTATTCTTTGGTGAGTCACATGTTAGAGGTGGGGAAAACGTTATTACATAGAGATGCACCTCAGTCCCAGCAGTACAGGTATTTATTGGGTTGTTTACAACTGTGCTTATTATTTTCTGCTTGTCCAGTTTGTGATATTAGATTGATCCATGATGCTGATTTAAATTGTAATTCCTACCACTAA 366 0.4208 MAGATASCVFCAIATKSTSLLHSDDKVVAFQDINPSAFRHYLVVPVAHIPTVKDLQRKTDDYSLVSHMLEVGKTLLHRDAPQSQQYRYLLGCLQLCLLFSACPVCDIRLIHDADLNCNSYH 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01701 121 Gene3D - 2 94 IPR036265 -
Cca06g01701 121 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 3 111 - -
Cca06g01701 121 Pfam Scavenger mRNA decapping enzyme C-term binding 7 83 - -
Cca06g01701 121 PANTHER APRATAXIN-RELATED 3 111 - -
Cca06g01701 121 SUPERFAMILY HIT-like 7 78 IPR036265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01701 Cca-Chr6 32289737 32290688 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01701 K22966 - gmx:100799719 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01701 06 32289737 32290688 Cca06g01701 06 32289737 32290688 ECH