Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01668 ATGGCTCTTCCTTCACTATCCTTTCTCTTCATCTTCTTCTCCTTCATCGTCTCCCTCTCACACTCAATACCCTTCATTCTTCTTCATGGAATTGGGGATCAGTGCTCTAACCGTGGAGTGAAAAGATTCACACAGAAATTGAGCAGCTTCTCCGGTGCTGAAGGATATTGTGTTGAGGTTGGAAATGGATCATGGGATTCATGGTTTTTGTCTTTGAAAGAGCAGACTGAGATTGTTTGTGAAAAGGTGAAGCAAATGAAAGAATTGAAGGAAGGATACAACGTCGTTGGACTTTCCCAGGGAAATTTAATTGGTCGAGGCGTGGTGGAATTTTGTGAAGGAGGACCTCCTATTAAAAACTTTATCTCTTTAGCAGGCCCTCATGCTGGTACTGCTTCAGTTCCCCTATGTGGTTCAGGTATCTTATGCGTTCTTGCAGATAACCTCATCAAGGGAGAGGTTTACAGTGACTATATTCAAGAACACTTAGCTCCTAGTGGATATCTTAAATTACCAAATGCCATACCTGATTATTTGGAGAAGTGTAGATTTCTCCCAGTGCTTAATAATGAAATACCAGACCAAAGAAATTCCACTTACAAGGAAAGATTTAGTAGCTTGCAGAACTTGGTACTTATCATGTTTGAGCACGACACTGTTTTAATACCAAAGGAAACTTCCTGGTTTGGATATTACCCAGATGGCTTCTTCAAGCCAGTTCTACCACCACAATCGACAGAACTCTACATTGAGGACTGGATAGGCTTAAGAACTCTAGATGAAGCTGGCAAAGTTCACTTTATTAGTGTTCCAGGAAAGCATCTTGAAATCTCCCAGGAGGACATGAAAAAGCATGTAGTGCCATATTTGAAGGATCAAACATCCACAAAAGATAGCACCAATAAAGGTAGGCTCAGGAGGAGAGAAAGTAATCGTAAAGTTATTCCAAGCAACACGATGGAACAATCTCAAATGGTGGAGATAGAACCATCAACCACTCCATTACTTGATGGATCTTTGTCATATTGGTGGTCTGCACCATTCAAGGCTTTCATTGCTGAAGTGATTGGCATTAATGAAGAGGAATCTACATAA 1095 0.4082 MALPSLSFLFIFFSFIVSLSHSIPFILLHGIGDQCSNRGVKRFTQKLSSFSGAEGYCVEVGNGSWDSWFLSLKEQTEIVCEKVKQMKELKEGYNVVGLSQGNLIGRGVVEFCEGGPPIKNFISLAGPHAGTASVPLCGSGILCVLADNLIKGEVYSDYIQEHLAPSGYLKLPNAIPDYLEKCRFLPVLNNEIPDQRNSTYKERFSSLQNLVLIMFEHDTVLIPKETSWFGYYPDGFFKPVLPPQSTELYIEDWIGLRTLDEAGKVHFISVPGKHLEISQEDMKKHVVPYLKDQTSTKDSTNKGRLRRRESNRKVIPSNTMEQSQMVEIEPSTTPLLDGSLSYWWSAPFKAFIAEVIGINEEEST 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01668 364 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 7 308 - -
Cca06g01668 364 Gene3D alpha/beta hydrolase 16 303 IPR029058 -
Cca06g01668 364 PRINTS Palmitoyl protein thioesterase signature 16 38 IPR002472 GO:0098599
Cca06g01668 364 PRINTS Palmitoyl protein thioesterase signature 222 240 IPR002472 GO:0098599
Cca06g01668 364 PRINTS Palmitoyl protein thioesterase signature 267 285 IPR002472 GO:0098599
Cca06g01668 364 MobiDBLite consensus disorder prediction 289 324 - -
Cca06g01668 364 Pfam Palmitoyl protein thioesterase 24 274 - -
Cca06g01668 364 MobiDBLite consensus disorder prediction 289 314 - -
Cca06g01668 364 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 308 - -
Cca06g01668 364 SUPERFAMILY alpha/beta-Hydrolases 20 290 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01668 Cca-Chr6 31927000 31931940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01668 17 317 Acyl Lipid Metabolism Gene Families AT3G60340 65.449 3.49e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01668 K01074 - gmx:100809770 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01668 06 31927000 31931940 Cca06g01668 06 31927000 31931940 ECH