Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01651 ATGGTTCAATTCCACGAACACATAATCACAGAGCTTCTAGAAGACTCCAATGGCGGCCTCGTCGTTCTCTCCTCCGGCCTCTCTCTCTCCAAACTCGTCTCCTCTCTCCTACTTCTCCACTCCTCCTCCCAAGGCACTCTCCTCATCCTCTCTCCATCCTCCGCTTCGCTCAAATCCAAAATCAACTTCCACCTCAAAACCCTAAACCCTCAATTCAACCAAATTCCCGCCGAAATCACCGCCGACCTCGCCGCGCACCACCGCCACGCGCTCTACACCTCCGGAAACGCCTTCTTCATCACGCCGCGGATCCTCGTCGTCGATCTCTTGACGAACAAGCTACCGACCTCGAAGATCGCCGGGATCTTCATCCTCAGCGCGCACTCGCTCTCGGAGACTTCGACCGAGGCCTTCATCGTCCGGATTTTCCGGTCGCTCAACCGCGGCGCGTATGTGCGGGCGTTCTCCGACCGGCCGCACGCGATGGTGTCGGGGTTCGCGAAGGCGGAGAGGACGATGAAGTGCCTGCACGTGCGGAGGCTGCACCTGTGGCCGCGGTTTCAGGTGTACGTGTCGCAGGAGCTGGAGAGGGACCCGCCGGAGGTGGTGGATATTAGGGTTCCGATGAGCAAGTACATGGTGGGGATTCAGAAGGCCATTGTGGAGGTCATGGACGCGTGCCTGAAGGAGATGAGGAAGACGAACAAGGTTGACGTGGAGGATTTGACGCTGGAGAACGGGTTGTTCAAGTCGTTTGATGAGATTGTGCGGAGACAGTTGGATCCGATTTGGCACACTTTGGGGAAGAAGACTAAGCAGCTCGTCTCCGACCTCAAGACTTTGAGGAAGCTGTTGGATTATCTTGTCAGGTATGATGCAGTAACTTACTTGAAATATTTGGATACACTGAGAGTTTCAGAGAGTTTTCGGTCTGTTTGGATATTTGCAGAGGCGAGCTATAAGATATTTGACTATGCAAAGAAGCGTGTTTTTCATCTTGTGAGGTTGGATGGTGTGAAATTTAATGAATCGAGTAAGGGTGTCAAAAACAAAAAGAGAAAAACTAAGGGTGATGACAAAAACATTGAAGAAGTTGATGGTACTTCATCATCTAGTTCAAATGCTGGCTTAATTCTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAAGTAGAGGAGGAAAGACAAAAACAAGGTATGTTGAGGGAAGAAGTATTGGCTGAAGGTGAAGACACTGATAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAACTAGAAGAATTCATCATGAATGGTCCAAAAAAGGTCATGCATGAAGAATGGAAGAAGTACTTACTAAACAAAGTTCAACTGCGTGACATAGTGCATAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGCATTCTTGATGGAGTTACTCCCATAACACCTGCACAGAATTCAGAAACCACCAGCATTAGTAAGCAGGAGCATGATGCACTTTTAGCAGCAGCATCAAAACTAAAAAATCTAGCTCAAAATGATAATGTTGTTGAGGATACCCCTCAGCCTGATGTTGGTGGACAGGGTCATGCTAAAAGAAAGAGAAAAGTGGGGGTTAGAAATCGTGCAGCTGTTCTTGATGGTTCTGGAGTTCAGAACAGTGATAAAGAGGAATCAACAAGTGATAAAATTAGGATGTCTGATTCAAAAAATAAAATCGATGTAGATGAGACTAATGCTGGTAGATTTTGTGAAACCATGAAGGACGGGACATCTGTGGAAAACATAGTTCTTCGAAGGCATACTAATCCTGATGCTGCAGCAAGTAACGGGAAGCCACTACCACCAGTGCATTTTTATGCTCTAGAAAGTGATCAGCCTATACTAGATATATTAAAGCCCTCTATAGTCATTGTTTACCATCCAGACATGACCTTTGTTAGGGAAATCGAAGTCTACAAAGCTGAGAATCCTTCAAAAAGGTTGAAAGTATATTTTCTTTTCTATGAAGAATCAACTGAGGTTCAGAAGTTTGAGGCTAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTAATTAGGCAAAAGTCTATGATGATGATTCCAGTTGACCAGAGTGGGCATTGTTTAGGATCGAATTCTTCTTTAGAGTCAGATTTAAATACTCCTCAAAACTCAGTAACCAGAAAAGCAGGTGGGAGAAAGGAGGCTGATAAAGAAATGCAGGTTATTGTTGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTGCTTCATCAGAAGGGAATGCGCATCATTCCAGTGACCCTAGAAGTTGGTGACTATATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACGTCAGGTCGTCTATACCACCAGGTGGAGACAATGGTACGATATTACAGAATACCTGTGCTCTTGATCGAGTTTTCACAGGATAAGAGCTTCTCGTTCCAGTCTGCTAGTGATATTGGTGATGATGTGACCCCAAATAGCGTTATATCAAAGTTGTCTTTGCTTGCTCTACACTTCCCCCGACTACGAATAATCTGGTCTCGAAGTTTGCATGCTACTGCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAGCCAGATGAAACAAAAGCAATCAGAGTGGGTGTCCCCTCAGAAGAGGGAATTGTGGAAAATGATGCGAGGGCTGAAAATTACAATACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGACTCAAACTACAGGGCCATAATGGATGGGTGCAAGAGCTTGGCAGAACTTGCACTTCTTCCTGTAGAGAAGCTAGCAGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGACTTTTTAGATGCTAAATACCCGACTTTGTTGTGA 2952 0.4526 MVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLLLHSSSQGTLLILSPSSASLKSKINFHLKTLNPQFNQIPAEITADLAAHHRHALYTSGNAFFITPRILVVDLLTNKLPTSKIAGIFILSAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDRPHAMVSGFAKAERTMKCLHVRRLHLWPRFQVYVSQELERDPPEVVDIRVPMSKYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTLENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRLDGVKFNESSKGVKNKKRKTKGDDKNIEEVDGTSSSSSNAGLILEEVLEEAPKWKVLREVLEEVEEERQKQGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEEFIMNGPKKVMHEEWKKYLLNKVQLRDIVHKKKKPKDPKPKGFGILDGVTPITPAQNSETTSISKQEHDALLAAASKLKNLAQNDNVVEDTPQPDVGGQGHAKRKRKVGVRNRAAVLDGSGVQNSDKEESTSDKIRMSDSKNKIDVDETNAGRFCETMKDGTSVENIVLRRHTNPDAAASNGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMTFVREIEVYKAENPSKRLKVYFLFYEESTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHCLGSNSSLESDLNTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSVISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDARAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLRDFLDAKYPTLL 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01651 983 MobiDBLite consensus disorder prediction 471 490 - -
Cca06g01651 983 SUPERFAMILY RuvA domain 2-like 912 978 IPR010994 -
Cca06g01651 983 MobiDBLite consensus disorder prediction 723 739 - -
Cca06g01651 983 MobiDBLite consensus disorder prediction 723 743 - -
Cca06g01651 983 SMART ERCC4_2 752 832 IPR006166 GO:0003677|GO:0004518
Cca06g01651 983 Pfam ERCC4 domain 755 884 IPR006166 GO:0003677|GO:0004518
Cca06g01651 983 Coils Coil 392 416 - -
Cca06g01651 983 SUPERFAMILY Restriction endonuclease-like 749 887 IPR011335 -
Cca06g01651 983 Gene3D - 752 899 - -
Cca06g01651 983 Gene3D - 910 981 - -
Cca06g01651 983 MobiDBLite consensus disorder prediction 526 578 - -
Cca06g01651 983 MobiDBLite consensus disorder prediction 347 372 - -
Cca06g01651 983 MobiDBLite consensus disorder prediction 347 365 - -
Cca06g01651 983 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01651 Cca-Chr6 31761027 31766891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01651 K10848 - gmx:100812359 1714.12