Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01621 ATGTCGAGAGCTGTGGAGATGACAATTTTGTCCGCCGAAAACCTCCAAATGAACAGAAGGCCCGTTAGAGGGAACACGTTTGTGACGGTTCAATCCGACGCTAGCAGCGAAACGAGTGCCACGAGAGTGGACTCGGAGGGTGGAAGTTACCCTTCGTGGAATGAGAAGGTTGTGATGGACGTGCCATTGCATGCAAGGTTCATAACCGTTGAGGTGAGGTGCAAAACGTCGTCGTCGGGGTCTAACAGCGTTGGCGTGGCGCGAATACCCGTTTCCGATTTTATTGGAGGCTACGTGCCCGAAAATCAGTTGCATTTCTTGAGCTATAGATTGTGGGACGGTAAAGTTAGGAGAAACGGGGTTATAAATATTTCGGTGAGGGTCAAAGTAGTGGAACATTCTTGTAATGCGAATTCTTCTATGCCAGTGACTGGGGTGCCCGTGGCTGCTAATGGCTCCACTGGGGTTGTTAGAGGGGTTCCAGCTCTGTGGTTAAACTACCAAACAAATATTTGA 516 0.4942 MSRAVEMTILSAENLQMNRRPVRGNTFVTVQSDASSETSATRVDSEGGSYPSWNEKVVMDVPLHARFITVEVRCKTSSSGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDGKVRRNGVINISVRVKVVEHSCNANSSMPVTGVPVAANGSTGVVRGVPALWLNYQTNI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01621 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 128 IPR035892 -
Cca06g01621 171 Pfam C2 domain 5 99 IPR000008 -
Cca06g01621 171 PANTHER - 4 131 - -
Cca06g01621 171 SMART C2_3c 4 103 IPR000008 -
Cca06g01621 171 PANTHER INGRESSION PROTEIN FIC1 4 131 - -
Cca06g01621 171 Gene3D C2 domain 3 129 IPR035892 -
Cca06g01621 171 CDD C2_SRC2_like 4 124 IPR044750 GO:0006952
Cca06g01621 171 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01621 Cca-Chr6 31344853 31345727 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01621 - - gmx:100527075 294.664