Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01613 ATGAAGCAGAATCGGCGAAGGGAGTGTTTGTCTAATTCGAATTCAGAAGGTTGGGCGAAATCAATGGTGGGAAGAGAACCCCCTCAGAATTTGTTACCCTCCAAACACGACTTCCCCAGACTGGTGGCGGTGCTTGCACTCGCATCGCTTGTTGCTTGGACCTGCAACTTCCTCTACACCTCTCTCCTCAATCCTCCTTCCAAACCCTTTTGCGATACCAACTTCCACTCTCTCGATTACTTTTCCGATGTCTGTGAACCTTGTCCAAGTAATGGAGAATGCAATGATGGCAAGTTGCAATGTCTTCAGGGTTACCAAAGGCATGGAAACTTATGTGTAGAAGATGGAGATATTAATGAATCAGCTCGAAAGACTGTGGAGAGAGTGGAACAACACCTTTGTGAAGAATATGCTAAACTTTTGTGCACTGGGATTGGAACAGTTTGGGTTTGTGAGGATGATTTGTGGAATTATTTTGAGCCAGCGGGAAATGTCAAAGTGGACAATACTCTTTATAATTATACAAAACAACGGGCGGTTGAGACAATGGATAAATTACTGGAGACAAGGTTCAACAACTCCCGTGGGATGAAGGAGTTTAAGTGTCCAGATCTGCTGGCAGAGCATTACAAGTCATACGCCTGCTGTATTCGTCAGTGGATCTCACAGCATATTCTAATTGTTTTGCCTATTTGTGTCATGCTTTTTGGATGCACAGCTTTGTTCTGGAACATACGAAAGAAACTATCCATGTCAAGACGAGTTGAGGAGCTTTATGATAAGGTCTGTGAAATACTCGAAGATAATGCGTTGACATCAAAGAGTGCAAATGGTGAATGTGAACCCTGGGTTGTTGCTTCTAGGTTACGAGATCACTTGCTTTTGCCAAGAGAGCGGAAAAACCCTTTATTATGGAAAAAGGTAGAAGATTTGGTTCAAGAAGATTCTCGAATAGATCGCTATCCGAAGTTGGTGAAGGGTGAATCAAAAGTAGTATGGGAATGGCAAGTTGAAGGCTCTCTGAGCGCCTCAAAGATGAAGAAAAGAAAAGATGCGAGCCAAACGAGTGTCAATGAAAGCATGGACCTGAATCATCAACAACGCCCTGCAATGAAAACAGAGTCTGTGGAACCAGTTTTTTGA 1143 0.4322 MKQNRRRECLSNSNSEGWAKSMVGREPPQNLLPSKHDFPRLVAVLALASLVAWTCNFLYTSLLNPPSKPFCDTNFHSLDYFSDVCEPCPSNGECNDGKLQCLQGYQRHGNLCVEDGDINESARKTVERVEQHLCEEYAKLLCTGIGTVWVCEDDLWNYFEPAGNVKVDNTLYNYTKQRAVETMDKLLETRFNNSRGMKEFKCPDLLAEHYKSYACCIRQWISQHILIVLPICVMLFGCTALFWNIRKKLSMSRRVEELYDKVCEILEDNALTSKSANGECEPWVVASRLRDHLLLPRERKNPLLWKKVEDLVQEDSRIDRYPKLVKGESKVVWEWQVEGSLSASKMKKRKDASQTSVNESMDLNHQQRPAMKTESVEPVF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01613 380 MobiDBLite consensus disorder prediction 342 380 - -
Cca06g01613 380 Pfam Man1-Src1p-C-terminal domain 69 335 IPR018996 -
Cca06g01613 380 PANTHER INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED 35 360 IPR044780 GO:0003682|GO:0005637
Cca06g01613 380 MobiDBLite consensus disorder prediction 356 371 - -
Cca06g01613 380 Gene3D - 240 335 IPR041885 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01613 - - gmx:100784375 681.019