Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01610 ATGGCATGTAGGGGATGCTGGGAGTGCCTTTTGAAGCTTTTGAACTTCATACTGACCCTGGCTGGTCTGGGCATTGTGGGCTATGGAATCTATCTTTTTGTGGAATTCTCTAAAGCTGCGGATGATGACATTCCGGATATTTCTCCTGTCAGTGATGATTCTTCTCTGATTCAACTTGGCCGGCCTATGCTTCTGGCCGTGTCTCTATCCAACAGCTTCTTTGATAACTTACCCAATGCATGGTATGTGTTTATTTACTTATTTATTGGCATTGGAGTAGTTCTCTTTGTTATTTCTTGTTTTGGTTGTATTGGAGCTGCAACACGAAATGGATGCTGCCTGAGCTGTTATTCAATTTTGGTGGTATTGTTGATCTTGGTAGAGCTGGGATGTGCAGCCTTTATATTCTTTGACAAAAACTGGAAAGAAGAAATTCCAACAGACAAAACTGGAGATTTTGATGTGATATATGGATTTCTGAGAGAGAATTGGAATATTGTGAAATGGTTTGCTCTTGGAATTGTTATCTTTCAGGCCATTCTTTTCCTGTTAGCCCTTATTGTTAGGGCTGCAAATAGGCCAGCAGATTATGATAGTGATGAGGAGTTCATTAATCCAAGGCAGCAAGCACGGCAACCATTGCTCAACAGACCAGCAGGCACAGCAACGGGGGTACCGGTTGCTGGGACAGTTGACCAGCGTCCAAGCAGAAATGATGCATGGAGTACACGGATGAGGGAGAAGTATGGGCTTGATACTTCGGAATTTACATACAACCCATCTGAGTCACACAGGTTCCAGCAAGTAAATTCACAGCAAACTGAGGAAAAGAGCCGCTGCACCATAATGTGA 852 0.4331 MACRGCWECLLKLLNFILTLAGLGIVGYGIYLFVEFSKAADDDIPDISPVSDDSSLIQLGRPMLLAVSLSNSFFDNLPNAWYVFIYLFIGIGVVLFVISCFGCIGAATRNGCCLSCYSILVVLLILVELGCAAFIFFDKNWKEEIPTDKTGDFDVIYGFLRENWNIVKWFALGIVIFQAILFLLALIVRAANRPADYDSDEEFINPRQQARQPLLNRPAGTATGVPVAGTVDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVNSQQTEEKSRCTIM 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01610 283 PANTHER TETRASPANIN 2 256 IPR018499 GO:0016021
Cca06g01610 283 MobiDBLite consensus disorder prediction 262 283 - -
Cca06g01610 283 Pfam Tetraspanin family 9 141 IPR018499 GO:0016021
Cca06g01610 283 PANTHER TETRASPANIN/PERIPHERIN-RELATED 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01610 Cca-Chr6 31276767 31280766 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01610 - - gmx:100791911 475.322