Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01602 ATGTCTTGCTTAGAAACTGAGGTCTGCCAAGAGAGAAAGCATGGAGAAGAATCAGAAGAGATCACTCTTGATGGGAGTGTTGATTTGCATGGCCGTCCTGCAATCAGAGCCAAATCTGGAAGATGGCCTGCTGGAATTATCTTACTCTTGAACCAAGGACTAGCAACCCTTGCATTCTTTGGGATCGGAGTGAACCTAGTGCTGTTCCTGACAAGGGTGGTAGGACAAAATAATGCTGAAGCTGCTAACAATGTGAGCAAGTGGACCGGAACAGTTTATATCTTCTCTCTTGTGGGTGCTTTCCTCAGTGACTCTTATTGGGGAAGATATAAAACTTGTGCTGTCTTTCAGGTCATCTTTGTTATAGGTCTAATGTCCTTATCCCTGTCCTCATACCTCTTCTTGATTAAGCCTAAAGGTTGTGGGAATGAATTACTTCATTGTGGGAAACATTCAAGATGGGAGATGGCGATGTTCTACCTCTCCATCTATCTGGTTGCCTTGGGGAATGGAGGTTATCAACCAACTATTGCCACATTTGGGGCTGATCAGTATGATGAGGAGCACTCAACGGAGGGTCACTCTAAGGTGGCCTTCTTTAGCTACTTCTACCTAGCTTTTAACATTGGCCAACTCTTCTCAAACACCATTCTGGTCTATTACGAGGATGAAGGAATGTGGGCTCTTGGTTTCTGGGTGTCTGCAGGCTGTGCCTTTGCCGCACTGGTCTTGTTTCTTGCAGGCACCCCGAGGTATAGACACTTCAAACCCAGTGGTAACCCTCTCTCCAGGTTTAGCCAAGTCCTCGTGGCTGCATCAAGGAAATCCAAATTTCAAATGTTATCAAATGGAGAGGACTTGTATGACATGGATATGAAGGAGCCTTCCAACAATAACAACAGAAAGATTCTCTACACTAGCGGTTTCAAGTTCTTGGATAGGGCAGCGTTGATAACTTCAAGGGATCTGGAGGACCAGAAAGAGATTGGTAACAACCCCTGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAATGCATACTGAGACTTCTTCCAATTTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCGCTTTTTGTAGAGCAAGGTGCTGCCATGAAAACAACAATTTCGCACTTCAAAATACCACCAGCTAGCATGTCTAGCTTTGATATCCTCAGTGTGGCAGTTTTCATTTTCTTTTACCGTCGAGTTCTTGATCCGTTTGTGGGTAAACTTAAAAAGACAGATTCCAAGGGTCTTACAGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTACTGGCAATGGTTTCGGCTGGAATAGTTGAATGCTATAGGCTCAAGTATGCAAAAAAAGGTTGCATCCACTGCAATGACACGAGCACTTTAAGCATCTTCTGGCAAATCCCTCAGTACGCATTTATAGGAGCTTCCGAGGTTTTCATGTACGTAGGCCAGTTGGAGTTCTTCAACGCTCAGACACCAGATGGCTTAAAGAGCTTTGGAAGTGCACTTTGCATGACATCCATTTCTCTTGGGAACTATGTGAGTAGCATACTTGTTAGTATGGTTATGAAGATCTCCACCGAGGATCACATGCCAGGATGGATCCCTGGAAACCTCAACAAAGGTCACTTAGATAGGTTTTACTTCCTCTTAGCCGCCATGACATCAATAGACATGATCGCCTATATTGCATGTGCAAAATGGTACAAGAGTATACAGCTAGGTGGAAAACCTGAAGAGAATGATGAGCCAGGAGTATAA 1791 0.4428 MSCLETEVCQERKHGEESEEITLDGSVDLHGRPAIRAKSGRWPAGIILLLNQGLATLAFFGIGVNLVLFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPKGCGNELLHCGKHSRWEMAMFYLSIYLVALGNGGYQPTIATFGADQYDEEHSTEGHSKVAFFSYFYLAFNIGQLFSNTILVYYEDEGMWALGFWVSAGCAFAALVLFLAGTPRYRHFKPSGNPLSRFSQVLVAASRKSKFQMLSNGEDLYDMDMKEPSNNNNRKILYTSGFKFLDRAALITSRDLEDQKEIGNNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISHFKIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKTDSKGLTELQRMGVGLVIAVLAMVSAGIVECYRLKYAKKGCIHCNDTSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSILVSMVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAAMTSIDMIAYIACAKWYKSIQLGGKPEENDEPGV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01602 596 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g01602 596 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Cca06g01602 596 CDD MFS_NPF7 42 578 - -
Cca06g01602 596 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca06g01602 596 SUPERFAMILY MFS general substrate transporter 33 585 IPR036259 -
Cca06g01602 596 Gene3D MFS general substrate transporter like domains 13 584 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01602 Cca-Chr6 31200769 31207693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01602 1 592 Organic Solute Cotransporters AT1G32450 74.454 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01602 K14638 - gmx:100776457 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01602 06 31200769 31207693 Cca11g01497 11 37884088 37887314 PCT