Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01596 atgaGTGGTATAGCGTTGTCCCCCGCGGCTTTGAGCCCCGTAATCCCTAACAGAATCAGGAAACTCAGACCAAAAGCCTCGCTCCACGCACAACAAGCTTTCACCTCTGACCCCTACGTTCTGGAACTGGCCGAAACGCTAGAAGAGTCCCTCCCCTCTTCTCCCTCCACCCCACTCCCTCTCCACAACCTCCGCCACGCCTCCTCCGAGGCCCTCCTCTCCACGCCATGGCCCTCCCGCCGCCACGAGCCCTTCCGCTTCACCGACCTCTCCTTCATCCGCCAATCCCGCATCCTCCCCGTCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccgccgcagacctcccccccGCTGTCTACGCCGGCGCCCTCTCCGCCCTATCCTCCCCCTCCCTCCTCCAACGCGTCTCCCAACTCCTCTCCCAATTCCACCACCATGACATCTTCTGGTCCATCAACGGAATCGCCGCCCCCGATTTAACCCTCATCTACGTCCCCGAGAACTGCCACGTCGACAACCCCATCCACTTGCACTACACCCCGCCGCACGCTACCACCCCCACCCCGAACACCATGCACCTTTCCAACCCCAGGGTCCTTGTCATCGTAGAAAAAGGAGCACACGTCCAAATAACTGAGGAGTTTTCCAATGAGAACCAAAATCACCCTTATTGGACTAATGCAGCTTTTGAGGCAGTGATTGGAGAAGCTGCCAACCTCACGCATTCTTATATCCAGACTCAGTCATTCCGTGCTGCTCACATCAAATGGACCTCTGTTCGTCAGGAATCGTCTAGTACGTACAAGCTCACCGAGGTGAGCTCGGGAGGAAAAGTGGGAAGGCACAATCTTCATATCCAGCAATTGGGACCTCACACCGTCACCGAGTTATCAACTTTGCATTTGTCTGTTGGGGATCAAACGCAGGACTTGCATAGTTCTCTTGTCTTGGACCATCCGCGGGGCTATTCTCGACAACTCCATAAATGCATTGTAACCCATTCTCAGGGACAAGCTGTTTTTGACGGAAACATTAAGGTTAACAGGTATGCTCAACAAACAGATGCAGGGCAGTTGACAAGAAGTCTTCTACTTGAGCCTCGTGCAACTGTGAATGTCAAACCGAATCTCCAAATTGTGGCTGATGATGTTAAGTGCTCCCATGGAGCTGCGATAAGTGACCTGGAACAAAGTCAACTGCTGTATTTTCAGGCACGCGGCATTGACATAAACACTGCTAGGAGAGTTCTGATTTTTGCTTTTGGAGGGGAGGTCATAGATAAGTTTCCTAATTCTTCCATTAGAGACAAAGTACGGAGTCAGATTAAAACGTTGTTGGATCCATCTTCGGATTCGTCGTCATTGTAG 1692 0.4096 MSGIALSPAALSPVIPNRIRKLRPKASLHAQQAFTSDPYVLELAETLEESLPSSPSTPLPLHNLRHASSEALLSTPWPSRRHEPFRFTDLSFIRQSRILPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPAADLPPAVYAGALSALSSPSLLQRVSQLLSQFHHHDIFWSINGIAAPDLTLIYVPENCHVDNPIHLHYTPPHATTPTPNTMHLSNPRVLVIVEKGAHVQITEEFSNENQNHPYWTNAAFEAVIGEAANLTHSYIQTQSFRAAHIKWTSVRQESSSTYKLTEVSSGGKVGRHNLHIQQLGPHTVTELSTLHLSVGDQTQDLHSSLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEQSQLLYFQARGIDINTARRVLIFAFGGEVIDKFPNSSIRDKVRSQIKTLLDPSSDSSSL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01596 563 SUPERFAMILY Stabilizer of iron transporter SufD 253 555 IPR037284 -
Cca06g01596 563 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 15 558 IPR011542 GO:0016226
Cca06g01596 563 TIGRFAM sufD: FeS assembly protein SufD 267 545 IPR011542 GO:0016226
Cca06g01596 563 Pfam SUF system FeS cluster assembly, SufBD 303 529 IPR000825 GO:0016226
Cca06g01596 563 MobiDBLite consensus disorder prediction 203 222 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01596 K09015 - gmx:100791104 521.931