Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01594 ATGGTTCCCAAAGTTTATGCTGGCCAAGAAATGGCAATGGAAGAGAATGAGAATTGCATGGTGAGTGGGAACTGGAAGAAACGTGTGCATGTTTTAGGTGAGAGGATGAGGAGAATTCCTTGTAAGGCTTGGCATACTACATGGAAGGTGGGACGTGAAGACCCAAGAAGGGTCATCCATGCATTCAAAGTGGGTTTGTCTCTAACTCTTGTTTCTATGTTGTATTTGTTGGAGCCACTTTTCAAGGGGATTGGGCAAAGTGCTATATGGGCAGTCATGACAGTTGTGGTTGTGTTGGAATTCACTGCAGGGGCAACGTTATGCAAAGGGCTCAATAGAGGATTGGGGACACTGTTAGCAGGATTATTGGCATTTCTTGTTGGGTATATTGGACATGCATCTGGCCGAGTCTGTCAAGCTATTATCATCGGAGCTGCAGTTTTTTTTATAGGAGCTCTAGCTACATATATGAGGTTTATTCCGTACATAAAGAAGAATTATGACTATGGTCTAGTTATATTTCTCTTGACTTTCAACCTGATCGCTGTGTCGAGTTATCGGGTTGATAATGTCTTGAAGATTGCACATGACCGTGTATACACCATTGCCATAGGCTGTGCAGTTTGCCTTCTGATGAGTCTACTGGTATTTCCAAATTGGTCCGGAGAAGACCTCCATAATTCCACAGTTTACAAGCTTGATGGCCTTGCCAAATCTATAGAAGCTTGTGTGAATGAGTACTTTTACGGAGAAATTGAAGGCACCGGAAATATGAAACTGTCTGATGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCATTGATGAAACACTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCAAGATACTGTCACAGATTTCCATGGCAGCAATATGTCAAAGTTGGAGCTGTTCTTCGTCAATTTGGTTATACTGTGGTAGCCTTACATGGCTGTTTGAGAACTGAAATTCAGACACCACGATCTGTGAGAGCCATGTTCAAGGACCCTTGCATTCGGCTTGCAGCAGAGGTATCAAAAGTACTGATAGAACTTTCCAACAGCATAAGGAATCGCCGCCATTGCTCCCCAGAAATCCTCTCTGATCATCTCCATGAAGCCCTTCAGGACCTCAACACTGCCATAAAATCTCAACCTCGCCTCTTCTTAGGCCCCAAACACAGGCACAGCCAAGCCACCAACATGCTCAAAATAGCTGCTGAACAAGTTGGTCAAGAAAGACATGGAAAAAGCTCACTATCAAGTGTTAAAACTGATTCTTCAGCATTGCTAGAATGGAAAACAAAAAGGGTTTCCACTGAACAGACAAAGGAATCAGAACGCAAGTCTTTAAGGCCACAGTTGAGTAAAATTGCTATCACTAGCCTTGAGTTCTCTGAGGCTCTTCCTTTTGCTGCTTTTGCATCGTTGCTTGTGGAAACCGTGGCTAAACTGGACCTTGTCATAGAGGAGGTTGAGGAACTGGGGAGATTAGCATGCTTTAAGGAGTTCATACCTGGTGATGAGGTTGTTGTCACTTGTGACGAGCCTCGAGTTGACGTGTTCCAGAACCATTTGCCTTCTCACGGAGTGGACTAA 1614 0.4374 MVPKVYAGQEMAMEENENCMVSGNWKKRVHVLGERMRRIPCKAWHTTWKVGREDPRRVIHAFKVGLSLTLVSMLYLLEPLFKGIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFLVGYIGHASGRVCQAIIIGAAVFFIGALATYMRFIPYIKKNYDYGLVIFLLTFNLIAVSSYRVDNVLKIAHDRVYTIAIGCAVCLLMSLLVFPNWSGEDLHNSTVYKLDGLAKSIEACVNEYFYGEIEGTGNMKLSDDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHSQATNMLKIAAEQVGQERHGKSSLSSVKTDSSALLEWKTKRVSTEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEVVVTCDEPRVDVFQNHLPSHGVD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01594 537 Pfam Aluminium activated malate transporter 48 501 IPR020966 GO:0015743
Cca06g01594 537 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 532 - -
Cca06g01594 537 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01594 Cca-Chr6 31102011 31105872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01594 1 522 Miscellaneous Gene Families AT4G17970 62.766 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01594 - - gmx:100788625 976.852