Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01585 ATGGCTTCGACGACGAACTTGTTAGCAACATTAGGGGATCTGGAGAGGGAATCGTTCGTGTCCCTTCTCTCGAAGCTGATTGGGGAATCGAAGCACGTGCAGAACAACCCGCCGGAGCTGATTCCCCAAGAGGACAGAGTGGTGAAGCACGTGCTCGACTCACTCTTACCCTTCAGCACCAGCACCGGCGGTGGCCCCTTGCTCCTCAACCACGTCGCCTACCTCCCCGGCCGAGGGAACCTCATCGTCGAGTACCCCGGCACCGTTCCCGGCAAAATCCTCTCCTTCGTCGGCTGCCACATGGACGTCGTCACCGCCAATCCCGACGATTGGGATTTTGATCCGTTTACGCTGAGCATCGATGGGGATAAGCTTCGGGGTCGTGGAACCACCGATTGCTTGGGACACGTGGCACTTGTCACGCAACTCATGAAGAAGCTCGGGGAAACCAAGCCAAAATTGAAATCCACTGTTGTTGCTGTTTTTATTGCCAATGAAGAGAATTCTGCAATTACTGGAGTTGGTGTAGATGCACTTGTCAATAATGGCCTCCTCAATAAGCTAAAGGATGGCCCTCTGTTTTGGATTGACACGGCTGATAAACAACCATGTGTAGGGACTGGAGGTATGATACCTTGGAAACTAAACGTCACAGGGAAGCTCTTTCACAGTGGATTAGCTCATAAAGCTATAAATGCACTGGAGCTAGCCATGGATGCTCTAAAGGAAATTCAGTTACGATTTTACCATGACTTTCCACCTCATCCTCGGGAACAGGTTTATGGGTTTGCAACCCCTTCAACCATGAAACCAACACAATGGAGTTATCCAGGAGGTGGAATAAACCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACAATGTCAAGGATGTAATGAAGAAGCTGCAAGAATACGTGAACAATATTAATGAGAATATACAAAAACTAGAAACAAGGGGTCCAGTTTCAAAATATGTCCTACCTGATGAAAACATAAAAGGAAGCCTTACTTTGACTTTTGACGAGGCATTGTCTGGTGTTGCTTGTGATCTTAATTCTAGAGGTTTCCATGTTTTATGCAAAGCAACTGAAGAAGTAGTTGGCCATGTAAAGCCTTACTCAATTACTGGGAGTTTGCCTCTCATTCGGGAACTACAGGATGAAGGTTTTGATGTTCAAACTTCGGGCTATGGCCTAATGGTTACTTACCATGCCAAGAATGAGTACTGCCTTTTTACGGACATGTCCCAAGGATATGGAGTCTTCGCCAGGATCATCTCTCAATTGGAAGATTCAGAATAG 1323 0.4679 MASTTNLLATLGDLERESFVSLLSKLIGESKHVQNNPPELIPQEDRVVKHVLDSLLPFSTSTGGGPLLLNHVAYLPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPDDWDFDPFTLSIDGDKLRGRGTTDCLGHVALVTQLMKKLGETKPKLKSTVVAVFIANEENSAITGVGVDALVNNGLLNKLKDGPLFWIDTADKQPCVGTGGMIPWKLNVTGKLFHSGLAHKAINALELAMDALKEIQLRFYHDFPPHPREQVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVNNINENIQKLETRGPVSKYVLPDENIKGSLTLTFDEALSGVACDLNSRGFHVLCKATEEVVGHVKPYSITGSLPLIRELQDEGFDVQTSGYGLMVTYHAKNEYCLFTDMSQGYGVFARIISQLEDSE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01585 440 CDD M20_ArgE-related 14 436 - -
Cca06g01585 440 SUPERFAMILY Zn-dependent exopeptidases 13 436 - -
Cca06g01585 440 Gene3D Zn peptidases 8 200 - -
Cca06g01585 440 PANTHER - 10 438 - -
Cca06g01585 440 Pfam Peptidase dimerisation domain 206 318 IPR011650 -
Cca06g01585 440 Gene3D - 209 325 - -
Cca06g01585 440 Coils Coil 306 326 - -
Cca06g01585 440 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Cca06g01585 440 PANTHER ACETYLORNITHINE DEACETYLASE 10 438 - -
Cca06g01585 440 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01585 K01438 - gmx:100814676 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01585 06 30993252 30998088 Cca06g01585 06 30993252 30998088 ECH