Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01385 ATGGGAAATCAACCGAGTAAGATACCTAGTGGAAGTGATGTTCCAACACCTATTAAAATGGGTACCCATTCTCTGTATGCGGCTGATTTAAGCTCTTATGAAGCTGCATGTGTTGAAGATCCAAACTTGCAATCCCTAGATGCTACCATTCAGGAGCGCACCAATAGGGTCATCACTTCACTTGCTCATGGGATTGAGGTTCGTTCCATATCCATTGAGTCATTAGGGGAAGTGACTGGTAGTTTGCTTGAGATGAATCAGGATGTTGCCAAAGTCATTCTAGAGTGCAAGCAAGATATATGGAATAAGAAAGACAGGGAATTGTTCTCCTTGGTGGAGGACTTCTTTGAAAATAGCCTCCAGACTTTAGAGTTTTGCAATGCTCTTGATAAATGTTTGAATCGAGCACGTGAAAGACATGTTATAGTTAAGTCTGCAATTACCTATTTTGAGGAAGAGGTACAAAAAGGGGTAGAAGGGTCCACTTATTTGAAGACATTGCAAGAGCTTAAGGGTTTCAAGGATGCCGGTGACCCCTTCACTGAAGAGTTTTATTCCTTGTTTCAACCGGTTTATCAACAGCAAGCATCAATGCTGAAGAAGTTGCAAATTAGAAAGCAAAAGCTTGATAAGAAATTGAAGTCACTCAAGACATTGAAGAGGGTGTCAAATGCCATCTTTGTGGCTGCTTTCGTGGCTGTTTTGATCTTCTCAGTGGTGGCAGCTGCGATTGCTGCACCACCTGTTGTAACTGCTTTGGCGGGTGCATTGGCTGTTCCAATAGGCTCAGTGGGGAAATGGTGCAACTCACTTTTTAAGCGATATGAGACAGCTTTAAAGGGCCAAAGAGAACTGATCAGTTCTATGCAGGTTGGTAGTTTCATTACATTGGCGGACTTGAAAAATATTCGGGTGCGCATCGACCAATTGGAAATAAAGATTGAATCCATGTTGCATAATGCTGATTTTGCTCTTAGAAATGAGGATGCTGTAAGGTTTGCAATCGAGGAGATTAAGAAGAATATAGACACTTTTGCAGAGACCATTGAGGCTTTGAGTAAGCAAGCTGATGAATGTAGTAGGCAAATAAGGAGAGCAAGGACAGTGGTTGTGAAAAAGATTATTAATTATACTGGTTGA 1140 0.4149 MGNQPSKIPSGSDVPTPIKMGTHSLYAADLSSYEAACVEDPNLQSLDATIQERTNRVITSLAHGIEVRSISIESLGEVTGSLLEMNQDVAKVILECKQDIWNKKDRELFSLVEDFFENSLQTLEFCNALDKCLNRARERHVIVKSAITYFEEEVQKGVEGSTYLKTLQELKGFKDAGDPFTEEFYSLFQPVYQQQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFVAAFVAVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKRYETALKGQRELISSMQVGSFITLADLKNIRVRIDQLEIKIESMLHNADFALRNEDAVRFAIEEIKKNIDTFAETIEALSKQADECSRQIRRARTVVVKKIINYTG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01385 379 Coils Coil 335 369 - -
Cca06g01385 379 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 377 - -
Cca06g01385 379 Coils Coil 300 327 - -
Cca06g01385 379 Pfam Protein of unknown function (DUF677) 43 374 IPR007749 -
Cca06g01385 379 Gene3D - 102 369 - -
Cca06g01385 379 PANTHER UPF0496 PROTEIN 3-RELATED 1 377 IPR007749 -
Cca06g01385 379 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01385 Cca-Chr6 28742058 28743982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01385 - - gmx:100819451 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01385 06 28742058 28743982 Cca06g01385 06 28742058 28743982 ECH