Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01377 ATGGGGAAAGGTGGAGGCTGCGTTCCCAGCAAGAAGAAGCCCCCGCCGGTCGCCGACGATGCTCCCACGGAACCCGCCGGAGCCTCCAGGGCGGCCTCGATCTCTGCCCCGGAGGACTCCCACGCGCCAGCGCAAGGAGCGACCACGTCGTCTTCGGCGCTCTCGCGCGGTGCCAAACTGAAGATCTTCATTGTGTTCTACTCGATGTACGGACACGTGGAGGGGCTGGCGAAGAGGTTGAAGAGAGGCGTGGACGGCGTGGAGGGTGTGGAAGGGGTTTTGTATAGGGTTCCGGAGACATTGCCGATTGAGGTGTTGAATCAGATGAGGGCGCCGCCCAAGGACGAGACAATACCGGAGATTACGGCGGCGGAGTTGGCGGCCGCCGATGGGGTGCTCTTTGGGTTCCCCACGAGGTACGGGTCGATGGCGGCGCAGATGAAGGCTTTCTTTGACTCCACCGGCCACTTGTGGAAGGAGCAGAAGCTTGCGGGGAAGCCCGCAGGGTTCTTTGTGAGTACTGGGACTCAAGGAGGAGGACAAGAAACTACTGCTTGGACGGCAATCACTCAGCTGGCACATCATGGAATGCTTTTTGTTCCTGTTGGATATACATTTGGACCCGGAATGTTCAAGATGGACTCCATTAGAGGGGGTTCTCCATATGGTGCAGGAGTGTTTGCTGGTGATGGCACAAGAGAGCCAAGTGAAACAGAGCTGGCTCTTGCAGAGCATCAGGGCAAGTATATGGCTATTGTAGTCAAGAGGCTCGCCCAGTCATGA 783 0.5811 MGKGGGCVPSKKKPPPVADDAPTEPAGASRAASISAPEDSHAPAQGATTSSSALSRGAKLKIFIVFYSMYGHVEGLAKRLKRGVDGVEGVEGVLYRVPETLPIEVLNQMRAPPKDETIPEITAAELAAADGVLFGFPTRYGSMAAQMKAFFDSTGHLWKEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPVGYTFGPGMFKMDSIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMAIVVKRLAQS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01377 260 MobiDBLite consensus disorder prediction 1 51 - -
Cca06g01377 260 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 61 256 IPR010089 GO:0003955|GO:0010181
Cca06g01377 260 Gene3D - 60 258 IPR029039 -
Cca06g01377 260 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 5 259 - -
Cca06g01377 260 Pfam NADPH-dependent FMN reductase 76 202 IPR005025 GO:0016491
Cca06g01377 260 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 259 - -
Cca06g01377 260 SUPERFAMILY Flavoproteins 61 257 IPR029039 -
Cca06g01377 260 ProSiteProfiles Flavodoxin-like domain profile. 62 250 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01377 Cca-Chr6 28639665 28641928 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01377 K03809 - gmx:100811224 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01377 06 28639665 28641928 Cca06g01377 06 28639665 28641928 ECH