Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01375 ATGGCTCTCCTCGGATCAAACATAACAAGCGAAGTTGGACTCCGTTTGCTCCTTTGTCCTCTTGGATCCAACGTTGTAATTCGAACAGCATGCTGCACTGTGGGAGTTGCTTTGCCTGTGTACTCTACGTTCAAGGCAATAGAAAGTAAAGATCAAAATGCTCAAAATAAGTGTCTTCTATACTGGGCAGCCTATGGTTCGTTCAGCCTCGTTGAAGTATTCACTGACAAGTTTATTTCTTGGTGTCCTATGTACTATCACCTGAAGTTTGCATTTCTTGTTTGGCTTCAACTTCCACCTACCAGTGGAGCAAAACAATTATATTCAAACCACTTGCGCCCCTTCTTGTTGAAGCATCAAGCTCGAGTTGATCGAGTCTTAGGTCTTGCATATTGTGAAGTAATCAAACTGGTCAGTTCATACCAAGCGGAGATCAAGTTTGTCAAGAGCATGGTAGTAAAGATAGCTGGATCAGCGGATCAAACGTTGAGAGGCCCTGCTGAATCAGATAGATCGCAGCAACACAGTTCATCGGAAGACCCTGCGGTGCTCTCTGACGCTGAACCTGACCAAAACCCCAATCATGGATGA 591 0.4467 MALLGSNITSEVGLRLLLCPLGSNVVIRTACCTVGVALPVYSTFKAIESKDQNAQNKCLLYWAAYGSFSLVEVFTDKFISWCPMYYHLKFAFLVWLQLPPTSGAKQLYSNHLRPFLLKHQARVDRVLGLAYCEVIKLVSSYQAEIKFVKSMVVKIAGSADQTLRGPAESDRSQQHSSSEDPAVLSDAEPDQNPNHG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01375 196 MobiDBLite consensus disorder prediction 161 196 - -
Cca06g01375 196 MobiDBLite consensus disorder prediction 165 181 - -
Cca06g01375 196 Pfam TB2/DP1, HVA22 family 39 115 IPR004345 -
Cca06g01375 196 PANTHER HVA22-LIKE PROTEIN K 1 185 - -
Cca06g01375 196 PANTHER HVA22-LIKE PROTEINS 1 185 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01375 Cca-Chr6 28594554 28598480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01375 K17279 - gmx:100811809 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01375 06 28594554 28598480 Cca06g01375 06 28594554 28598480 ECH