Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01370 ATGGAGCCTCGCAATGCTTCGCCGTTATCACGAGTCTTTTTCTTCTTTGTTACTATTTCCTTGTGTGGAGTGAGTGCATTAAGTGAAGATCATCATGTCAAGCTTCAGAAAGGATCTGTGGTGGAAAAGGACCAGAGGAGGACATTACTTGCCACTGAATATGGAGAGATCACTGCCATTGATATCAAGGAAGGACCAGAGAAACCACCCTACCATCTTCAGTTCTTCACGTTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTCCATGCAGACATGGTCTTTTATGTTCATACAGGGAGTGGAAAGCTAACTAAAGCAAATGATGGTGGTACTAGCAGCATCCCTTTACGGGAAGGAGATCTCTGCAGTCTCAATGAAGGATCTGTTTTCTACATACAGAGCAACTTAGATGCTGAGAGAAGGAAACTTAGGATTTATGCAATGTTTACCAATACAGAAGACAATACTTTCGATCCATCAATCGGTGCTTACTCAAGGATCAGTGAAATGGTCAAGGGCTTTGATAAGAAAATCATGCAAGCAGCTTTGAAGGTACCGGATGATGTGATTGAAGAAATCATTAACAAGAGCAACACCCCAGCTATAGTGCATGCGGTTTCAGAGAAGAGGAATGTTATCCGGGAACTGGAGGTTTCGTTTCTTAAAAACTTTTTAGGCGTTGGGTCCAACTCCAAGAAACTAAAAACATACAACATCTTTAAAAATAACCCTGACTTCAAAAGCCATGATGGATGGAGCATAGCAGTGACCAAAAAGCAACTAAAATCATTGAAGCGCACCAACATTGGATTTCTGATGGTGCATTTGAGCTTGGGATCAATATTGGGGCCTCATTGGAACCCAAAGGCAACAGAGTTGTCGGTGGTATTGGAAGGGGAAGGCATGGTCCGAGCAGTGTGTGGAATCAGCAATGATGAGACAGAATGCCAAAACATGAGGTTTAAGGTTAATGAAGGGGATGCTTTTGTGGTGCCTAGGTTTCATCCAATGGCTCAGATGTCATTCAACGATGGACCGTTTGTTTTTCTTGGCTTCAGCACTTCAGCAAAGAAAAACCGTCCTCAGTTTTTGGCGGGAAAGGGATCAGTGCTTCATGTTCTAGACAAACAGATACTGGCTACCTCTTTTGGTGTGAGTAACAGAACTATTGACCAGCTTTTAAGTTCTGACGATGACTCCATCGTTTTCGGGTGTAGTTCCTGCGCTGAGGAAGAGGAGAGGATAATGAAGGAGGAAGAGGTGAAGAAGGAGGAGGAAAGGAAGAGAAAAGAAGAGGAAGAGGAGAGAAAGAGGAAGAAGGAAGAGGAGGAGGAGAGGAAGAGAAAGGAAGAGGAAGAGGAGAGGAAGAGAAAAGAGGAAGAGAAGGAAGCAAGGGAAAAGGAGGAAAGGAGGAAGAGAAAAGAGGAAGAGAAGGAAGCAAGGGAAAAGGAGGAAAGGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGACAACAAGAAGAGAGGGAGAGGAAGAGAGAGGAGGAGAGGGAGCAAGAAGAAGCTGGGAGAGAGAAGGAAAGGGCAAGAGAAGAAGAAGCTAAGAAGGAAGAAGAAGCAGCTAGCAAGGAACAAGAGAAGAGGGAGAGGGAAAGGGAAAGGGAGGAAGAAGCAGCTAAAAGAGAGCAAGAAAAGAGAGAAAAGAGGAGACAGGAGGAGAAGCAAGAAGAGGAGGAAGAAAAGGAACAAGAACAAGCTAAAAGAGAAGAAGAAGCTAGTAAGGAACAGGAGAAGAGGGAGAGGGAGAGGGAAAAGGAAGAAGAAGAAGCTAGTAAGGAACAGGAGAAGAGGGAGAGGGAGAGGGAAAGGGAGGAAGAAGCAGCTAAAAGAGAGCAAGAAAAGAGAGAAAAGAGGAGACAAGAGGAGAAAGCTAAAAGAGAGCAAGAAGAGGAGGAAGAAAAGGAACAAGAACAAGCTAAAAGAGAAGAAGAAGCTAGTAAGGAACAGGAGAAGAGGGAGATGGAGAGGGAAAGGGAAAGGGAAGAAGAAGAAGCTAGTAAGGAACAGGAGAAGAGGGAGAGGGAAAGGGAAAGGGAGGAAGAAGCAGGTAAAAGAGAGCAAGAAAAGAGAGAAAAAAGGAGACAAGAGGAGAAAGCTAAAAGAGAGGAAAAAGAGGAGGAAGAAAAGGAACAAAAACAAGCTGAAAGAAAAGAAAAAGAAAAAGAAGAAGAAGAAGAAACAGCAGTAAGGGAACAAGAACAGAAACAAGCTAAAAGAGAACAACAAAAGAGAGAGAGTAAAAGAGAGCATGAAAGGGAAAAAGAGAAGGAAAGAGAGGAAGAACAAAGAGGAGAGCAAGAAGAAACAGCAGGGAAGGAACAAGAACAAGAACAGGCTGGAAGAGAACAACAGAAGAGAGAGGAGGAGGAACAAGGGGAAAGAGGAGAAGAACCGAGGGAAAGTCGAGGTGTAGAGTGGGAGCAAGAAGAGGCCAGAAAACAGCAAGAAGAGAGGGAAAGAAGAAGAGAGCAAGAGGGTGATAAAAAAGACCAAAGCCACAGAATCAGCTTTGAAGGAAGGAGAGTTCTGAAAATAAGGCATGTTTGA 2586 0.4397 MEPRNASPLSRVFFFFVTISLCGVSALSEDHHVKLQKGSVVEKDQRRTLLATEYGEITAIDIKEGPEKPPYHLQFFTLEPNSLFLPVLLHADMVFYVHTGSGKLTKANDGGTSSIPLREGDLCSLNEGSVFYIQSNLDAERRKLRIYAMFTNTEDNTFDPSIGAYSRISEMVKGFDKKIMQAALKVPDDVIEEIINKSNTPAIVHAVSEKRNVIRELEVSFLKNFLGVGSNSKKLKTYNIFKNNPDFKSHDGWSIAVTKKQLKSLKRTNIGFLMVHLSLGSILGPHWNPKATELSVVLEGEGMVRAVCGISNDETECQNMRFKVNEGDAFVVPRFHPMAQMSFNDGPFVFLGFSTSAKKNRPQFLAGKGSVLHVLDKQILATSFGVSNRTIDQLLSSDDDSIVFGCSSCAEEEERIMKEEEVKKEEERKRKEEEEERKRKKEEEEERKRKEEEEERKRKEEEKEAREKEERRKRKEEEKEAREKEERRKREEEEAKRQQEERERKREEEREQEEAGREKERAREEEAKKEEEAASKEQEKREREREREEEAAKREQEKREKRRQEEKQEEEEEKEQEQAKREEEASKEQEKREREREKEEEEASKEQEKREREREREEEAAKREQEKREKRRQEEKAKREQEEEEEKEQEQAKREEEASKEQEKREMEREREREEEEASKEQEKREREREREEEAGKREQEKREKRRQEEKAKREEKEEEEKEQKQAERKEKEKEEEEETAVREQEQKQAKREQQKRESKREHEREKEKEREEEQRGEQEETAGKEQEQEQAGREQQKREEEEQGERGEEPRESRGVEWEQEEARKQQEERERRREQEGDKKDQSHRISFEGRRVLKIRHV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01370 861 Coils Coil 817 837 - -
Cca06g01370 861 MobiDBLite consensus disorder prediction 415 855 - -
Cca06g01370 861 SUPERFAMILY RmlC-like cupins 10 398 IPR011051 -
Cca06g01370 861 Coils Coil 409 805 - -
Cca06g01370 861 PANTHER PREPROMP73 12 457 - -
Cca06g01370 861 Gene3D Jelly Rolls 34 217 IPR014710 -
Cca06g01370 861 PANTHER OS03G0336100 PROTEIN-RELATED 12 457 - -
Cca06g01370 861 Gene3D Jelly Rolls 229 408 IPR014710 -
Cca06g01370 861 CDD cupin_7S_vicilin-like_C 245 401 - -
Cca06g01370 861 MobiDBLite consensus disorder prediction 415 861 - -
Cca06g01370 861 SMART Cupin_1_3 238 392 IPR006045 -
Cca06g01370 861 CDD cupin_7S_vicilin-like_N 49 217 - -
Cca06g01370 861 Pfam Cupin 238 390 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01370 Cca-Chr6 28542989 28547034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01370 8 413 Miscellaneous Gene Families AT2G18540 44.470 8.43e-109 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01370 - - ccaj:109801342 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01370 06 28542989 28547034 Cca06g01370 06 28542989 28547034 ECH