Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01347 ATGACGCTGGGTCTGATCAATGCGAACCCCGTGGTTCACGCCAAGAAAGAGAGAATCTCTCGCTCCGAAGATCCTCACGCCATCCTTGACTTCGCTTCGATTGTCCTCTCCGAGGAATCAATCACCGTCGATCACGAATTAGGCCGAATTCTGATTACTTTTACGCCCACCGTTCAGCACTGTAGCATGGCCACGGTTATCGGTCTTTGTCTCAGAGTCAAACTCAAGCACTACTTCCCTCCTCACTACAAAGTGGACATCAAGGTTTCTCCTGGATCTCATGCTGACGAAGAATCAGTCAACAAGCAGTTAAATGATAAAGAAAGAGTGGTTGCTGCCTTGGAGAATCCCAACCTCCGCCAGCTTGTGGAAGAGTGTCTCTACTCAAATGAACTGTGA 399 0.4862 MTLGLINANPVVHAKKERISRSEDPHAILDFASIVLSEESITVDHELGRILITFTPTVQHCSMATVIGLCLRVKLKHYFPPHYKVDIKVSPGSHADEESVNKQLNDKERVVAALENPNLRQLVEECLYSNEL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01347 132 PANTHER PROTEIN AE7-LIKE 1 1 27 - -
Cca06g01347 132 PANTHER PROTEIN AE7-LIKE 1 35 131 - -
Cca06g01347 132 PANTHER UNCHARACTERIZED 35 131 IPR039796 GO:0106035
Cca06g01347 132 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 40 102 IPR034904 -
Cca06g01347 132 Gene3D - 97 127 - -
Cca06g01347 132 Gene3D - 11 95 IPR034904 -
Cca06g01347 132 PANTHER UNCHARACTERIZED 1 27 IPR039796 GO:0106035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01347 Cca-Chr6 28305643 28308505 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01347 - - gmx:100305681 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01347 06 28305643 28308505 Cca06g01347 06 28305643 28308505 ECH