Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01325 ATGGCGATGGTTTCCATGGCATTCGGTGTCAACACTGCGACCTTTCCGAATCTCAACAGGTGTCGAGGAATGGCATTTGCAAGTTTGAGTAACAAAGCGAGTGCGTCTTTGGGAGTGCGAGTCACGGAAGGAGAGGGGAATTTGCCGAAGCTTGTGCTTACTTCCCCCGCTGGTAGTGAGGCTGAGATATACCTGTTTGGAGGTTGCATTACCTCTTGGAAAGTTCCCGGTGGCAAGGACCTTCTTTTTGTTCGCCCTGACGCTGTTTTTAATGGGAAGAAACCGATAAGTGGAGGCGTCCCGCATTGTTTTCCACAGTTTGGTCCTGGTCCAATTCAGCAGCATGGGTTTGCAAGGAATATGGATTGGACTGTTGTTGATTCTGAAAATACGGAAGGAAATCCTGTTGTAACTCTGGAACTGAAGGATGCTCCTTATAGTCGTGATATGTGGGATTTCGGCTTCCATGCTTTATTCAAGGTCACACTAAATGCTAAAAGTCTTTCGACCGAGTTAACAGTTAAAAATACAGACGATAAAGCATTCTCATTTAGTACTGCCTTGCACACATATTTTCGAGCATCTGTGAGTGGTGCATCAGTAAAGGGGTTAAAAGGTTGCAAAACTCTCAACAAAGATCCAGATCCTAAAAATCCAGTCGAGGGTAGGGAAGAAAGGGACGTGGTCACTTTCCCTGGATTTGTAGATTGTGTTTATCTCGATGCTTCCAGTGAGTTGCAACTTGACAATGGTTTGGGTGATCTAATATCTATCAAGAACACAAATTGGTCAGATGCCGTGTTGTGGAATCCTCATCTTCAAATGGAGGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCCAAGATTGGAAGTGTCCAGCTAGAGCCAGAACAAACTTGGACAGCTGTGCAGCACCTTAGCATAGCTTGA 933 0.448 MAMVSMAFGVNTATFPNLNRCRGMAFASLSNKASASLGVRVTEGEGNLPKLVLTSPAGSEAEIYLFGGCITSWKVPGGKDLLFVRPDAVFNGKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTVVDSENTEGNPVVTLELKDAPYSRDMWDFGFHALFKVTLNAKSLSTELTVKNTDDKAFSFSTALHTYFRASVSGASVKGLKGCKTLNKDPDPKNPVEGREERDVVTFPGFVDCVYLDASSELQLDNGLGDLISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSIA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01325 310 Pfam Aldose 1-epimerase 50 307 IPR008183 GO:0005975|GO:0016853
Cca06g01325 310 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 309 - -
Cca06g01325 310 Gene3D - 22 310 IPR014718 GO:0030246
Cca06g01325 310 SUPERFAMILY Galactose mutarotase-like 50 307 IPR011013 GO:0003824|GO:0005975|GO:0030246
Cca06g01325 310 CDD D-hex-6-P-epi_like 50 308 IPR025532 -
Cca06g01325 310 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 17 309 - -
Cca06g01325 310 PIRSF PHexose_mutarotase 27 310 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01325 Cca-Chr6 28133741 28137283 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01325 K01792 - gmx:100797902 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01325 06 28133741 28137283 Cca06g01325 06 28133741 28137283 ECH