Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01317 ATGGCTCACCATGAAGACTCAAATGCTTGGAATTCGGGTTTACCTCACCCTAAGCTCAATGAAAGAATACTTTCTTCTCTGTCGCGGAGAACTGTTGCTGCTCACCCCTGGCACGACTTGGAGATCGGGCCAGGAGCTCCATCTGTTTTCAACTGTGTGGTTGAAATTGGCAAAGGCAGTAAGGTTAAGTATGAGCTGGACAAGACAAGTGGACTTATAAAGGTTGATCGTATTCTTTACTCATCAGTTGTCTACCCACACAATTATGGTTTTATCCCTAGAACCATCTGTGAAGACAGTGATCCTATGGATGTGCTGGTTCTAATGCAGGAACCCGTGCTTCCTGGTTCCTTCCTTCGTGCTCGTGCTATTGGACTAATGCCCATGATTGACCAGGGTGAGAGGGATGACAAGATCATAGCAGTTTGTGCTGATGACCCTGAGTTCCGTCACTACACGGACATCAAGGAGCTTCCTCCACATCGGCTAGCTGAAATCAGAAGATTCTTTGAGGACTACAAGAAGAATGAGAACAAAAAAGTTGCTGTTGAAGACTTTCTACCAGCTGAAGCTGCCATTGATGCCATCAAGTACTCCATGGACTTATATGCTGCTTACATAGTTGAGAGCTTAAGGCACTGA 642 0.4564 MAHHEDSNAWNSGLPHPKLNERILSSLSRRTVAAHPWHDLEIGPGAPSVFNCVVEIGKGSKVKYELDKTSGLIKVDRILYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQGERDDKIIAVCADDPEFRHYTDIKELPPHRLAEIRRFFEDYKKNENKKVAVEDFLPAEAAIDAIKYSMDLYAAYIVESLRH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01317 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
Cca06g01317 213 PANTHER INORGANIC PYROPHOSPHATASE 18 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca06g01317 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca06g01317 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca06g01317 213 SUPERFAMILY Inorganic pyrophosphatase 30 208 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca06g01317 213 CDD pyrophosphatase 49 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Cca06g01317 213 PANTHER BNAC07G03580D PROTEIN 18 207 - -
Cca06g01317 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01317 Cca-Chr6 28006145 28009333 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01317 K01507 - gmx:100306258 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01317 06 28006145 28009333 Cca06g01317 06 28006145 28009333 ECH