Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01315 ATGGCGCATTCTCGCCAACCTAACAAGTCCGGCGTCACGCTTTCCGGCAAGATCAACAGCAATGGGAGCTTCTCCGGTACCAAGAGCCTATACGACGACGTTTACGGAGGTCCACCGAGCTTCGGCGTTTCCAACCTCTCCCCTCGTTTCGAAGACTACGCCGAGATTTTCGGAAGCTTCCACACCGCACGCGCCTCTTCCATTCCCCTCCTCGATCTTCCCGCCGTCCACGACGCCGAGGCCTTCTTCGATCCCCGAACCCACGCTTTCAACTACACCGAGGTTTTCGGCGCCTTCGATTTTGCGCTTCCGTACGACGACGTGTTCCACCGCCACAGTGCTCTCGACGGCGTCTCCTCCGAAGAAGTCTGGACTCCAGCAGAAACTGACTCATTCTCTGGAGAGTCAGACCGTTCTGCAAATAATCAAAGTATGTTGAATGGAGATCTTTTCCATTCCGTTGACACTGATAGGGGGTTCAACAATTTATATCATAATAAGGTCAATGGTATAAGCAACGAGCATAAGCCAAAGGGGAAAACTCGCATGACTCAGCTGCATGGTGTTCCTGGTTTCAGTCGAGTAAATGATGCAACCACACAATTGCATCAGACTGATTCATCCTTTCAGATTGCTGATGATATTGATTCTGATATAGAGCTTGGCCCAGACAAAGTGAAGGGAAACCACCAGAGGAAAACAGTGGCACATCCGCATAATTTTACCTCTGGGGAACAGACTTCTGCTAGTGATCTAAATGTTCAAAATGGAAGCAGCAGAAATGATTCTCATTCCAGTGAGATGTTCATAACTGTATCTGACATTAGCCTCAGAAGTAAGCCCTCTCAGGTGCCACCCCCTTCTCGTCCACCTCCTTTATTGGATGCAAAAAAGGGAGACATCTGTGGATTTCATTCAAACAGCAGGCCGGTTGCTTCTGAAGAGACACCGGGTGCTGGTTCACCACCTTTCTTTGATGTGGATGATCATATGAATTCATCTGCTACAGCTTCTGCTGATTCTATGAGAGAAGCAATGCTTAGAACGGAAGCAAAATTTAGGAGTGCCAAAGAATTAAAAGAGAGGCAGAAAGGGGATTGTGAAAGCCATTTAAAATCAAGTTATGATGTAAAAACTGAAGAAGCAAAGATGTGTAAGGATATCACTAGATTAAGTAGTATAAATGATGAGACAATGCAGGGAAGTTATGATAGGAGACATTCCAAAACGAAATTCTCTGTCATTGATGACAGGCAGAAACTTAATAAGGCTTCTGCAGAAACTCTGGACAATTTAGAAGGGAAAAGAGTTTTAAACATGTTTGAGGAAAAGGACAAGATGGAATCCAGGTCATCTCAAGAGTCCGATAGCAGTATGGGAGTTGGGACATGGAAAGATGAATCTGAATTTTTTGAATTGGTGGGAATGGAAGAATCTGGAATGGTAATTCAACCCACAAAGCAGAGTAAGAATTTGGTGCAAGGTACTGGAACCCATAAACATGGGCAGCAAGAAAGAGAAGCGTCTAATGTGCAAGAAAAACATAAACAAGTAAAACCAGCTGAAGATAATTATCAGGGGGAGGAGTATGAGGAAAAATATATAGCAGCAAAAGAGGCTTGTGAACATGATGAAAACATTATGAAATCTGAAGCATCTAATGGGGAATGGAGGCAAAAAGAGCAGATGAAAAAAGTAAAAATGGTCAAAGTATTTGAGGTGGAAGAGAATGAGAAGAGTATAAAAATAGCCCACCACCATGGAATAACTGAAAAGAAAGAAACTGAAGCTGACCAATCTGGAATCATAGAAGATGCGTGTGAAAGAAGACATGGAGATAATAAACACGTGGAAACCCAGAAACCCAAAGAGGTTGATAGAAAAACACCAAATGAAGTTGATCTAGTCATGGGGCTTAGGGAAAATGAGAAGATACTAAAAGAGGTTGAAAAGCAACAGCAGAGTGTGAAAAGGCACAAGCAATCTGAGAAAATCGAAGAAAATGGAAAAACACAAAGAGAAGCTTTTGGTCTAGGACAAACCGAGCATGATGAAAAACTGGAAGGTTCTGTGGAGCAGGAAAATATTGATGAAAGATCAAATGCAGCTTTTGAACCAAATTACATAGAGAAAAAAGAGGCCTGCAAAAGGGAAAATGAAACAAGATTAAAACTAGGTAAACAGATTCAGATCAACGAGGAACTAAAAGAAGCTCACGAAAGAGTAGAAGTTGAGAAAAGCCTCAAAAGCCTTTATGAAAATGAAGAAAATGATGAGGGCCTAATACCTGCTTTCGGGTGGGATGAGGATGGAAAGCAACTTAAAGAAGACTTTGAACTGGAAGTAAATGAAATAAGACTGAAAGAGGCTTTTGAGCAAAGAGAAAATGAGGCATATGAAAGAGATCAAGAAGCAGGTGTCAACAAAGGGATTCAAAATGTCATTGGGAGCACTTCAAATGAAACACTTGCCATGGGAGGAAGTGGAACTGTATCAAATGGGAATAGTCACATGGAGCAATATGAGAATATGGACAAAGATGTAGGTGGAAGGGATAAAGATACGGGACTGAAAAAAGCTTTGGATGACATGGGGAGAAATGAAGGAGGAAACATGACGAATGTTAAAGCAACTGATGAGATAGAGAGTGATGAAGATCTAGCAACTCAATCAGCCTCCATTCATGAAGAAATTATTGGAAAACTGAAGGTATATAAAGAAACTGTTGCTGACCAAGATATTGGAAAGTTGAGAACCGAATGCAAAGTTGGAGAAAAGGAATTGAAAGAGACAGGGATGGAAAATCAACTGGATAATGAAAAAATCAGGGCACCTGAAATGACTGCAGGAGATGCAGCGCGTTCGGGAACCCAGTCAGAAAAGGTGGGTGACAGAGTGACAAAGGCTGATTACAGAAGCACAGAAGCAGCTGAACGTGCTACAGTACAGGAGACCGTAAATGTCCAGAAGACTGCTCAGTGGTTTAATGTTGGTCAAGTCACAGAAAGCAAAGCAAAGACTATTAATGAAACTCCTGCTATACTGAAAGATGCTAAAAGGATGAGAAAAGAAAGAGAGTCAGAAAAGGATCATCTTAGAAAGATAGAAGAGGAAAGGGATAGAGAGAAAGAACAAGAAAGGGACAGAAAATATGTTGAGAAAGTAATGCTGGAGGCTGAGAGAGAAAGGGAAAGAGAAAAGGATCGGGATAGGATGGCTGTTGATAGAGCAACCTTTGAGGCTCGCAATAGGGCATATGCTGAAGCTTGTGAAAGGGATGCATTTGAAAGAGCAACTGTGGAAGCACGGTACAAAGCACTGGCCGAGGCCAGGGAAAGACTTGAGAAGGCATGTGCTGAGGCCAGGGATAAGTCACACATAGATAAAGAAACTACAGAGGCAAGACTGAAAGCAGAACGTGCTGCTGTAGAAAGAGCAACTGCAGAGGCTCAAGACCGAGCCATGGAAAAATTAAAGATTGAGAGGACCGTGTTTGAGTCCAGAGAACGGTTAGAGAGATCTGTATCTGACAATTTTTGCGGAAGACAAGACTCTTCATCCCCCGATATGCTGGATCAACAGTTTCAGAACTTTGGCTCTTCCACTGGTTCCAGACATCCATATTCACTTTATGGTGCTGCCTCTTTTTCTGAGAGATCAGAAAGAGAAGGTGAATCAGTTCAGAGGTGTAGAGCTAGACTGGAGCGGCATCGCCGAACTGCTGAGCGTGCAGCAAAAGCTTTGGCAGAAAAGAACATGCGTGACCTTCTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGACTATCAGAGACCCTGGATGCCGAAGTAAAGAGGTGGTCTGGTGGAAAAGAAGGAAACTTGCGTGCCTTACTTTCTACCTTGCAGTATATCCTTGGGCCTGATTCTGGGTGGCAACCAATCCCATTGACAGAGGTCATTACTGCTGCTGCTGTGAAAAAAGCTTACAGGAAGGCCACCCTGTGTGTTCATCCTGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATATGTGAAAAGGTTTTTGATCTTTTGAAGGAAGCTTGGAACAAATTCAACTCAGAGGAGCGAAGCTTCACATTGGCCGGTCAGGATGTGAAAAGAGGCGAATTTGTCTGTGCTATTGGTTTTGATACGGAAAGTGCTGGAAGCTTCACTGTTACTGTGGCGCTTGATTCTTTGGGCTAG 4215 0.4316 MAHSRQPNKSGVTLSGKINSNGSFSGTKSLYDDVYGGPPSFGVSNLSPRFEDYAEIFGSFHTARASSIPLLDLPAVHDAEAFFDPRTHAFNYTEVFGAFDFALPYDDVFHRHSALDGVSSEEVWTPAETDSFSGESDRSANNQSMLNGDLFHSVDTDRGFNNLYHNKVNGISNEHKPKGKTRMTQLHGVPGFSRVNDATTQLHQTDSSFQIADDIDSDIELGPDKVKGNHQRKTVAHPHNFTSGEQTSASDLNVQNGSSRNDSHSSEMFITVSDISLRSKPSQVPPPSRPPPLLDAKKGDICGFHSNSRPVASEETPGAGSPPFFDVDDHMNSSATASADSMREAMLRTEAKFRSAKELKERQKGDCESHLKSSYDVKTEEAKMCKDITRLSSINDETMQGSYDRRHSKTKFSVIDDRQKLNKASAETLDNLEGKRVLNMFEEKDKMESRSSQESDSSMGVGTWKDESEFFELVGMEESGMVIQPTKQSKNLVQGTGTHKHGQQEREASNVQEKHKQVKPAEDNYQGEEYEEKYIAAKEACEHDENIMKSEASNGEWRQKEQMKKVKMVKVFEVEENEKSIKIAHHHGITEKKETEADQSGIIEDACERRHGDNKHVETQKPKEVDRKTPNEVDLVMGLRENEKILKEVEKQQQSVKRHKQSEKIEENGKTQREAFGLGQTEHDEKLEGSVEQENIDERSNAAFEPNYIEKKEACKRENETRLKLGKQIQINEELKEAHERVEVEKSLKSLYENEENDEGLIPAFGWDEDGKQLKEDFELEVNEIRLKEAFEQRENEAYERDQEAGVNKGIQNVIGSTSNETLAMGGSGTVSNGNSHMEQYENMDKDVGGRDKDTGLKKALDDMGRNEGGNMTNVKATDEIESDEDLATQSASIHEEIIGKLKVYKETVADQDIGKLRTECKVGEKELKETGMENQLDNEKIRAPEMTAGDAARSGTQSEKVGDRVTKADYRSTEAAERATVQETVNVQKTAQWFNVGQVTESKAKTINETPAILKDAKRMRKERESEKDHLRKIEEERDREKEQERDRKYVEKVMLEAEREREREKDRDRMAVDRATFEARNRAYAEACERDAFERATVEARYKALAEARERLEKACAEARDKSHIDKETTEARLKAERAAVERATAEAQDRAMEKLKIERTVFESRERLERSVSDNFCGRQDSSSPDMLDQQFQNFGSSTGSRHPYSLYGAASFSERSEREGESVQRCRARLERHRRTAERAAKALAEKNMRDLLAQKEQAERNRLSETLDAEVKRWSGGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITAAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEERSFTLAGQDVKRGEFVCAIGFDTESAGSFTVTVALDSLG 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01315 1404 MobiDBLite consensus disorder prediction 843 873 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 235 267 - -
Cca06g01315 1404 ProSiteProfiles dnaJ domain profile. 1302 1366 IPR001623 -
Cca06g01315 1404 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 4 743 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 1178 1206 - -
Cca06g01315 1404 Gene3D DnaJ domain 1240 1366 IPR036869 -
Cca06g01315 1404 Coils Coil 1129 1153 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 651 699 - -
Cca06g01315 1404 Coils Coil 1097 1124 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 220 267 - -
Cca06g01315 1404 Coils Coil 1227 1278 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 1018 1049 - -
Cca06g01315 1404 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 727 1361 - -
Cca06g01315 1404 SUPERFAMILY Chaperone J-domain 1203 1365 IPR036869 -
Cca06g01315 1404 Coils Coil 1015 1048 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 611 631 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 1176 1206 - -
Cca06g01315 1404 Coils Coil 642 662 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 931 947 - -
Cca06g01315 1404 PANTHER AUXILIN, ISOFORM A 727 1361 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 843 865 - -
Cca06g01315 1404 MobiDBLite consensus disorder prediction 931 971 - -
Cca06g01315 1404 PANTHER AUXILIN, ISOFORM A 4 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01315 Cca-Chr6 27980963 27988150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01315 - - ccaj:109800215 2587.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01315 06 27980963 27988150 Cca06g01315 06 27980963 27988150 ECH