Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01290 ATGGCGGCGACGTCGTATCTGACGGCGACGCAGAGGTACGCAGCGGGAGCGCTGTTTGGGCTGGCTCTGCATCAGGCCCAACTTCACCAGACTCACCCTCTGGGCCTATCCACCGACGACTTCCCTTGTGAAAGTGAAAGCCCTGTCGCAGTTTCCGAAGACCCCAACCTTTGGGCCCATCACCATTCCGCTTTGCTCCGTCCTGTTTTCAAGTACCTAGATATTGATTCCGCAGCTTGGTCTGGACTCGAGGAAACTGCTGGCTCTGCTTCAGCTACACGTCACGTCGGACCATTCTTGAGACTATTATCAGAGGAACTTGATGATGATTCTTCCCAAAGGTCAGATCAAGAACTTGCTTTGTCAGAAGCCGTTGATGCCATGGTACTTAGGCTGGAAATGAATTCAGATTCTCCCAGGTCTAGAAGGAAAAAGTTACGTGAATATGAGCACCAATGCCGTGAAAAGTTTTCAACTGCTGATGCTGAACCAAATTCTGAGAAGGTAGATATAAAATTAGAAACCCAGTCGAGGACAGGTACAAGTACTCCTTTCCTTGACTGTGAAGAGCCACATGAGGGATCTATCGATGGTTATATTGATGAGTGTCCAGTTGAAGAGGTAATGATTCTCAGCTATCAGAGGAAGCTGACAGTGCTCTACGAACTTCTCTCTGCCTGTCTGTCAGATTTAGACGAAAATAACAAGAAATATAGGCAGAGGAGAAAGGGCTATGATGCTCGACATCGTGTCTCTCTACGACTGCTGGCAACTTGGCTTGATATCAAGTGGACAAAAATGGAAGCCATTGAGACATTAGTTTCTAGTTCTGCAATGGCTTTCATTAAAGAGCAAGAGTCAAGTAAAGAAGAAACTCAGGCAAAAGAAAGCAAGTGGGCTAAATGGAAGAGGGGTGGTATTATTGGTGCTGCTGCCTTAACTGGGGGAACTTTGATGGCTATTACTGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACTTTGGGTACTCTGATCCCTGTTATCGGAGCAAGTGGATttgctgcagctgctagtgctgctggaactgttgctggttctgttgctgttgctgCATCATTTGGAGCTGCTGGAGCTGGACTCACTGGAACCAAAATGGCTAGGAGAGTTGGGGATGTTGATGAGTTTGAATTCAAAGCTATAGGAGAAAACCATAACCAAGGTAGGCTTGGGGTTGAGATCATGATCTCTGGATTTATCTTTGAGGATGACGATTTTATAAGGCCATGGGAAGGACTGAATGACAACTTAGAGAGGTATGCACTACAGTGGGAGTCCAAGAATCTAATTGCCCTGAGCACTGCAATTCAGAATTGGCTTACTTCAAGAATTGCAACGGAGCTGATGAAGCAAGGGGCAATGATGACTGTCATGCATGCTCTTTTAACTGCATTGGCTTGGCCAGCAGCATTATTTGCAGCAACTGAATTCATAGACAGCATATGGACAATTGCTATTGACAGAACAGACAAGGCAGGAAAGTTGCTTGCTGAAGTATTATTGGGAGGATTGCAGGGAAATAGGCCTGTGACACTTGTAGGTTACTCACTTGGGGCTAGAGTTATTTTCAAGTGTCTTGAGTTTTTGGCTGAAACAGAGAACAGTGCTGAACTGGTAGAGAGAGTTGTTCTTCTTGGAGCACCCATTGCGATCAAGGATGAGAATTGGGAAGCTGCTAGAAAGATGGTTGCAGGAAGATTTGTAAATGCCTATTCAAGAAATGACTGGATGCTTGGAGTTGCTTTCCGCGCCAGGTACACAAGAATTTAG 1827 0.4455 MAATSYLTATQRYAAGALFGLALHQAQLHQTHPLGLSTDDFPCESESPVAVSEDPNLWAHHHSALLRPVFKYLDIDSAAWSGLEETAGSASATRHVGPFLRLLSEELDDDSSQRSDQELALSEAVDAMVLRLEMNSDSPRSRRKKLREYEHQCREKFSTADAEPNSEKVDIKLETQSRTGTSTPFLDCEEPHEGSIDGYIDECPVEEVMILSYQRKLTVLYELLSACLSDLDENNKKYRQRRKGYDARHRVSLRLLATWLDIKWTKMEAIETLVSSSAMAFIKEQESSKEETQAKESKWAKWKRGGIIGAAALTGGTLMAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRVGDVDEFEFKAIGENHNQGRLGVEIMISGFIFEDDDFIRPWEGLNDNLERYALQWESKNLIALSTAIQNWLTSRIATELMKQGAMMTVMHALLTALAWPAALFAATEFIDSIWTIAIDRTDKAGKLLAEVLLGGLQGNRPVTLVGYSLGARVIFKCLEFLAETENSAELVERVVLLGAPIAIKDENWEAARKMVAGRFVNAYSRNDWMLGVAFRARYTRI 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01290 608 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 3 604 IPR007941 -
Cca06g01290 608 SUPERFAMILY alpha/beta-Hydrolases 524 589 IPR029058 -
Cca06g01290 608 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 3 604 - -
Cca06g01290 608 Coils Coil 228 248 - -
Cca06g01290 608 Gene3D alpha/beta hydrolase 498 607 IPR029058 -
Cca06g01290 608 Pfam Protein of unknown function (DUF726) 301 604 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01290 Cca-Chr6 27594307 27601963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01290 - - gmx:100782894 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01290 06 27594307 27601963 Cca06g01290 06 27594307 27601963 ECH