Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01287 ATGTTGCAGAGACCCAGACGTCGTTGCGAGGGCACAGCCATGGGCGCTATCGTCCTCGATCTCCGACCCGGTCTTGGAATCGGACCCTTCTCCCTCGGGATGCCTATATGTGAAGCTTTTGCTCAGATTGAACAACAGCCTAATATATACGATGTGGTGCATGTAAAGTATTTTGACGAGGAACCTCTAAAGTTGGACATTGTCATTAGCTTTCCGGATCATGGCTTCCATCTTCGTTTTGATCCATGGTCTCAGAGACTGCGCCTTATTGAAATATTTGATGTAAAGCGACTTCAGATGCGCTATTCTACTTCTCTGATTGGGGGACCTTCAACGTTGGCTACTTTTGTTGCTGTATATGCACTGTTTGGGCCCACGTATCCTGGAACTTTTGATAAGGATAGAGGCATTTACACCTTATTCTATCCGGGGCTTTCCTTTGCATTTCCTATTCCTAGTCAATTTACAGACTGCTGCCATGATGGGGGAGTTGAATTGCCATTGGAGTTTCCAGACGGGACAACTCCTGTCACATGCCGTGTCTCTATATATGATAGCTCCTCTGGTAAGAAGGTTGGCGTGGGTTCCTTGATGGATAAGGCTTCTGCTCCACCTCTACCTGCTGGCAGCATATACATGGAAGAGGTCCATGTTAAGCTGGGGGAAGAATTGTACTTCACAGTTGGCTCGCAACATATTCCTTTTGGTGCATCTCCACAGGATGTGTGGACTGAGCTTGGACGTCCCTGTGGCATTCATCAAAAGCAGGTAGATCAAATGGTTATTCATTCTGCCTCAGATCTTCGGCCACGAACAACTCTATGTGGAGATTACTTTTATAATTATTTTACTCGTGGTCTTGACATACTATTTGATGGACAGACTCACAAAATCAAGAAGTTTGTGTTACACACCAACTACCCTGGACATGCTGATTTCAATTCTTACATTAAGTGCAACTTTGTTATCTATGGCTCAGATTGTAAGCAATCTTTTATATGCATTACAGTGTTTAGTTTGGTCTTGATGCAACAGGTATGTAAATCTATGTTGTTAAATATGATAAAATCTATTTTTGGCCTTTCCAGCTGTAGGGGGTTCTTTTCAGGAAGTAAATAA 1119 0.4343 MLQRPRRRCEGTAMGAIVLDLRPGLGIGPFSLGMPICEAFAQIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYSTSLIGGPSTLATFVAVYALFGPTYPGTFDKDRGIYTLFYPGLSFAFPIPSQFTDCCHDGGVELPLEFPDGTTPVTCRVSIYDSSSGKKVGVGSLMDKASAPPLPAGSIYMEEVHVKLGEELYFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIYGSDCKQSFICITVFSLVLMQQVCKSMLLNMIKSIFGLSSCRGFFSGSK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01287 372 Pfam Phagosome assembly factor 1 27 330 IPR005373 -
Cca06g01287 372 PANTHER UPF0183 PROTEIN C16ORF70 12 326 IPR005373 -
Cca06g01287 372 PANTHER UPF0183 PROTEIN 12 326 IPR039156 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01287 - - aprc:113869507 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01287 06 27552916 27558491 Cca06g01287 06 27552916 27558491 ECH