Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01285 ATGAAGATGGAGATTGAGGAAGTTGGTGGAGCACAAGCACTTCCCCTGCTTTCACTCAATCACGTGTCCCTTTTGTGCAGATCAGTGTGGGAGTCTATGAGGTTTTATGAGGATGTCTTGGGCTTTGTTCCTATCAAACGCCCTTCTTCTTTCAATTTCACTGGAGCATGGTTTTACAATTATGGTGTTGGAATACACTTGATCGAGAATCCACACATCGATGAATTTGATACCTGCGTCAATGAATCGAGGCCTATTAATCCCAAGGACAACCATATCTCATTCCAGTGCACTGATGTTGAGCTTGTTAAGAAAAGGCTAGAAGAGAGGGGAATGAGGTATGTGACAGCTGTGGTAGAGGAAGGAGGGATCAAGGTGGACCAGGTGTTCTTCCATGACCCTGATGGCTACATGATTGAGCTCTGCAACTGTGACAATATCCCCATCATTCCTATTTCTTCTTGCTCTTTCAAGCCTCGTGGCCAGAGCTTCAAGAAAACTGCTCCTTACAAGTGTGGATTCATGGAGAATGTCATGATGGAAAGTTTGAGCACCGACATGATCAATTTCTCCTTTTAA 579 0.4421 MKMEIEEVGGAQALPLLSLNHVSLLCRSVWESMRFYEDVLGFVPIKRPSSFNFTGAWFYNYGVGIHLIENPHIDEFDTCVNESRPINPKDNHISFQCTDVELVKKRLEERGMRYVTAVVEEGGIKVDQVFFHDPDGYMIELCNCDNIPIIPISSCSFKPRGQSFKKTAPYKCGFMENVMMESLSTDMINFSF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01285 192 CDD VOC_like 19 141 - -
Cca06g01285 192 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 16 144 IPR029068 -
Cca06g01285 192 Gene3D - 20 144 IPR029068 -
Cca06g01285 192 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 18 144 IPR037523 -
Cca06g01285 192 PANTHER LACTOYLGLUTATHIONE LYASE/GLYOXALASE I FAMILY PROTEIN 2 192 - -
Cca06g01285 192 PANTHER - 2 192 - -
Cca06g01285 192 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 141 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01285 Cca-Chr6 27536926 27538690 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01285 - - gmx:100499688 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01285 06 27536926 27538690 Cca06g01285 06 27536926 27538690 ECH