Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01245 ATGGGTTGCTGCCACTCCAAACTAGAGAGTGAAGAAACGGTGTCGCGTTGCAAAGCCAGGAAGCGTTACATGAAGCAGTTCGTGCAAGCAAGACACGCTTTCTCCGCCGCGCATGTCATGTACATTCGCTCACTCCGTGCCACCGGTTCCGCACTCTTTCACTTCGCCAACGCCGAAACCACCGTCCTCCGCCACGGAAACCACCACCTTCCGCCGCGACCTCACCCCATTCTCccgccgccgccgccgagaactcccacccccatgccgccgccgcctcctcctccgATGAGCCCCAGCTCCTACACGAATGGCAAAGATCTTGTTGAAGTTATCAAAGAGCTTGATGACTATTTTCTCAAAGCTGCTGATGCTGGTTCCCATGTTTCTTTGCTCCTTGAAGTTCCAAGCTCTGGATTTTCTGATAGAAGTAAAGCATGTAAAGTGCACAGCTATGGGTGGAGTTTGAGTCCTTCATCATGGGCTTGGGGTTCAAGTCCTAAACTGAACGGGTTTGGCAAGCTGGCTGAGGCAACTCCTGTTTCTGTTGGTGCTTTTGGGGCTAATGGAGTTGGAACTGTAGGGCACTGCTCCACTGTGGAGAGACTATATGCATGGGAGAAGAAACTGTACCAAGAGGTTAAGAATGCTAAGACTATAAAGATGGAGCATGAGAAGAAGTTGGCACTGCTAAGGAAGGTGGAGTTGAAGAGAGCTGATTATGTGAAGACAGAGAAGACAAGGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCTCAGGCCATTGATAGTACATCTGCTGAAATCAACAAATTAAGGGAGGTAGAGCTCTACCCTCAACTCATTGAGCTTGTCAAAGGATTAATGTGCATGTGGAGAAGCATGTATGAGTGCCACCAAGTCCAAAGGCACATAGTTCAGCAGCTAGAGTACCTCAACACCATACCATCAAACAATCCCACATCCGAGATCCACAGGCAATCAACACTTCAGCTGGAGCTAGAAGTGCAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCGCACCGTGACTACATCCAATCCCTCACAGGCTGGCTAAGGCTAAGCCTTTTCCAGTTCAGCAAGAACCCTCTGAGCAGAACCCCGGAGGAGTCAAAGATATACACCCTTTGTGAAGAGTGGCACCTCGCCGTCGATCGCATTCCGGACACAGCAGCATCAGAAGGAATAAAGAGCTTGTTGACAGTTATCCATGCCATTGTAGTGCAGCAAGCAGAGGAGCACAAACAAAAGAAGAAGTCAGATTCTGCATTCAAAGAACTTGAGAAGAAGGTGGTTCAGCTTCGTTCCTTGGAGTGCAAGTATGGTCCATACTCCATGCCGGAATCCTTGAGAAGCAATAAGGACCCGGTTACCGAGAAGCGTGCCAAGGTGGAAGGCTTGAGGGCCAAGGCAGAGGAGGAGAAGAGCAAGTATGAGAAGTCAGTGAGTGTAACAAGGGCAATGACACTGAACAACTTGCAAATGGGTTGCCCTCAAGTGTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTGAGTCTGTATACAACAAAGCCAAAGTTGCTGAACAGGAGCATGACGTGAAGAGAATATTACCATAG 1647 0.4657 MGCCHSKLESEETVSRCKARKRYMKQFVQARHAFSAAHVMYIRSLRATGSALFHFANAETTVLRHGNHHLPPRPHPILPPPPPRTPTPMPPPPPPPMSPSSYTNGKDLVEVIKELDDYFLKAADAGSHVSLLLEVPSSGFSDRSKACKVHSYGWSLSPSSWAWGSSPKLNGFGKLAEATPVSVGAFGANGVGTVGHCSTVERLYAWEKKLYQEVKNAKTIKMEHEKKLALLRKVELKRADYVKTEKTRKEVEKLESQMMVASQAIDSTSAEINKLREVELYPQLIELVKGLMCMWRSMYECHQVQRHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIQSLTGWLRLSLFQFSKNPLSRTPEESKIYTLCEEWHLAVDRIPDTAASEGIKSLLTVIHAIVVQQAEEHKQKKKSDSAFKELEKKVVQLRSLECKYGPYSMPESLRSNKDPVTEKRAKVEGLRAKAEEEKSKYEKSVSVTRAMTLNNLQMGCPQVFQGIVGFSSVCMEVFESVYNKAKVAEQEHDVKRILP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01245 548 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 98 - -
Cca06g01245 548 MobiDBLite consensus disorder prediction 66 99 - -
Cca06g01245 548 MobiDBLite consensus disorder prediction 72 99 - -
Cca06g01245 548 Pfam Protein of unknown function (DUF632) 108 416 IPR006867 -
Cca06g01245 548 PANTHER UNCHARACTERIZED 103 533 - -
Cca06g01245 548 PANTHER UNCHARACTERIZED 1 98 - -
Cca06g01245 548 Coils Coil 469 493 - -
Cca06g01245 548 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 103 533 - -
Cca06g01245 548 Coils Coil 244 271 - -
Cca06g01245 548 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01245 Cca-Chr6 26931595 26936021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01245 1 62 Acyl Lipid Metabolism Gene Families AT2G27090 35.484 3.91e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01245 - - gmx:100808077 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01245 06 26931595 26936021 Cca06g01245 06 26931595 26936021 ECH