Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01244 ATGGCAGGCCAACTTACAAGATCAAGAAGACTAGAAACTCAGCAGCAGGAACAGTCAAGGGCTAGGTGGACGACATCACTCACTAAGATACTTGCACAGCTTATGGTTGACCAAGTACATAAAGGGAACAAACATAACAATTTATTCAATAAGAAAGCATGGAAATATATTTGTGATGAATTTTACAGCAAAACAGGTCTGAAATGGGACAAGGAGCAACTCAAAAACCGGTATTCGGTCTTGAGGAGGCAGTATGCTATTGTAAAGTCCATACTTGATCAAAGTGACTTTAATTGGGATGAAGCCACAGGATCTATAACAGCTAATGATGAAATTTGGGCTGAATATATCAAGAAACATCCCGATGCTGAGACTGTCAAAACCGGTGGCTGCCCAATCTTTAAGGAACTCTGCACAATATTTTCTGAGCCAGCAACCAATGGCAAGCATGAATATTTAGTTGCATCTGAGAGTGAACATACTTCTATAACTCCTTGTCCAGAGTTCTTGAACATGCACCAAGAGGAGACCTCATCTGAATCTCAGGATGAGGAAGATGCTATTGACCCTCAAACAGTTCAACCTACTACACCTACTGCTACTTCTACCCGTAAAAGAGGGCGTAAAGGAATTGATGATGCTATTGCAAATGCCATATTTGAGATGGCATCTGCTTCAAAGATGAGGGCAGTTGCCATAGAACAACAAAATGCTAGATTTAGCATTGCTGACTGTATTAGGGACTTAGATTTGATGCAAGGTGTTGATCAACAACTTTATTTTGCTGCTCTAAATCTGTTCAACAAACCTAATGCAAGGGAGATATTTTTGTCTCTCAAAAAGGATAAACGTTTAACTTGGTTGCGTGGCAAGTGTGCTGTTGCATCCAATTAA 894 0.4016 MAGQLTRSRRLETQQQEQSRARWTTSLTKILAQLMVDQVHKGNKHNNLFNKKAWKYICDEFYSKTGLKWDKEQLKNRYSVLRRQYAIVKSILDQSDFNWDEATGSITANDEIWAEYIKKHPDAETVKTGGCPIFKELCTIFSEPATNGKHEYLVASESEHTSITPCPEFLNMHQEETSSESQDEEDAIDPQTVQPTTPTATSTRKRGRKGIDDAIANAIFEMASASKMRAVAIEQQNARFSIADCIRDLDLMQGVDQQLYFAALNLFNKPNAREIFLSLKKDKRLTWLRGKCAVASN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01244 297 MobiDBLite consensus disorder prediction 188 204 - -
Cca06g01244 297 MobiDBLite consensus disorder prediction 1 20 - -
Cca06g01244 297 PANTHER - 1 296 - -
Cca06g01244 297 MobiDBLite consensus disorder prediction 174 208 - -
Cca06g01244 297 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR024752 -
Cca06g01244 297 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01244 Cca-Chr6 26927075 26930067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01244 - - gmx:102661909 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01244 06 26927075 26930067 Cca06g01244 06 26927075 26930067 ECH