Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01243 ATGGATCCCTTCGCTGCTAAATCCCAACCTGCACTTCCCGAAATCGTCCAAGTCGATTTGGGCAATCGGAGCTATCCCATTTATATCGGATCCGGGTTGCTACACGAACCAGACTATCTCCAGAGGCATGTTCATGGGAAGAGGGTCCTAGTTGTAACCAACAAAACGGTTGCACCACTTTATCTAGACAAGGTTGTAGATGCTTTGACAAGGGGAAACCCAAATGTTTCTGTGGAGAGTGTAATTTTACCTGATGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTCTTCGACAAGGCCATCGAGTCGCGACTGGACAGGCGGTGTACATTTGTTGCCCTTGGTGGCGGTGTGATTGGTGACATGTGTGGCTTTGCTGCTGCTTCCTTCCTACGTGGTGTTAATTTTATTCAGATTCCTACCACTGTGATGGCACAGGTCGATTCTTCAGTTGGTGGCAAAACTGGGATAAATCATCACCTTGGAAAGAACCTGATCGGGGCTTTTTACCAACCTCAGTGTGTGCTTGTAGACACAGACACATTAAATACGTTACCAGATAGGGAACTGGCATCAGGGTTTGCAGAGGTTATAAAGTATGGCCTCATTAGGGATGCAGAGTTTTTTGAGTGGCAAGAGGAAAATATGCAGGCATTACTGGCAAGAGATCCTAGTGCACTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTTTCCTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACTGGGGTTGGCTATGGGCAGTGGCTTCACGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCCTATCGCCTAGGTTGGATTGATGATTCTATTGTGAAGCGAGTTGGAGACATTTTAAAACAGGCTAAGTTACCTACAGCTCCTCCTGAGACCATGACTGTGGACATGTTTAAATCTGTCATGGCGGTGGATAAGAAGGTAGCAGATGGGTTGCTAAGGCTTATCCTTCTAAAGGGTCCTCTGGGAAATTGTGTTTTCACGGGGGATTATGACAGAAAGGCCCTAGACGATACGCTTCATGCATTCTGTAAATCTTGA 1134 0.4621 MDPFAAKSQPALPEIVQVDLGNRSYPIYIGSGLLHEPDYLQRHVHGKRVLVVTNKTVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLVDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEENMQALLARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVGDILKQAKLPTAPPETMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLHAFCKS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01243 377 CDD DHQS 24 371 - -
Cca06g01243 377 Pfam 3-dehydroquinate synthase 81 339 IPR030960 -
Cca06g01243 377 PANTHER 3-DEHYDROQUINATE SYNTHASE 13 373 - -
Cca06g01243 377 Gene3D - 2 186 - -
Cca06g01243 377 Gene3D - 187 377 - -
Cca06g01243 377 SUPERFAMILY Dehydroquinate synthase-like 16 367 - -
Cca06g01243 377 Hamap 3-dehydroquinate synthase [aroB]. 13 375 IPR016037 GO:0003856|GO:0005737|GO:0009073
Cca06g01243 377 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 13 373 - -
Cca06g01243 377 PIRSF 3dhq_synth 16 372 IPR030963 GO:0009073|GO:0016838
Cca06g01243 377 TIGRFAM aroB: 3-dehydroquinate synthase 25 365 IPR016037 GO:0003856|GO:0005737|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01243 K01735 - gmx:100806628 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01243 06 26917218 26920479 Cca06g01243 06 26917218 26920479 ECH