Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01186 ATGGAGAGGGCAGATTCTGTGCAGAAGCTGTACACGCGCATGCGACTCTGGGAATTTCCGGATCAATTTGTGATTGAACCAACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTCGATGGCTCCATGAAGCTCATCGATGAGGTTCCGGAGTGCAGCTCGCTTCGAGTTCCTAAGATTTTTACAATTTTCGGTGTTGTTGGGATGTTGAGGCTCTTGGCTGGTTCATACTTGCTGGTTATAACTGAGCGTGAATGTGTTGGATCTTACCTGGGGCATCCAATTTTTAAAGTTTCTAGATTGAAGGTGTTTCCATGTGATAATTCTCTTAAAACTACCCCCGCTGAACAGAAGAAAATAGAGATGGAATTTTCTGGGCTGCTTAATGTTGCTGAGAAAACCTCTGGTCTGTTCTTCTCATATGAAACTAATTTAACTCTGAGTGCACAACGGTTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTCCTATGGAACAATTATATTTTAGAAGTGCTCATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTCCAAGGCAGCTTTTATCACTTTCAAGCAGCCATTGGGATAGACATTATTGATGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTTGCCAATTTTGTGGAAACAGAACAAATTATGCAGTTTAATGGGTATACTGCTTCATTTGTTCAGGTCCGTGGTTCTATTCCTCTCCCCTGGCAGCAAATTGTTGACTTAACTTACAAACCAAAGTTCGAGTTATTGAAACCTGAGGAAGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGAGCAGTATTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGACTGTGTGAAAAATTTGGTAGTACAATGCAGCATGTGGCTAGTAACGATGTAAGATATCTGCACTTTGATTTTCACCATGTCTGTGGGCACATTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATATCAGATTTTCTTGAGAGAAACGGATATCTTCTGTTAAATGAGAAGGGAGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGCCTAGACCGTACAAATGTAACTCAGAGCATGATTGGCCGGAATATGTTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATAAGTTCACATCCAAATCTGGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTACTCAATACTCTGGAACTCCTGCTCTTAAAGGAGATTTTGTCAGATTTGGGCACCGCACAGTTCAAGGAGTTATACAAGATGGTTGTAATGCTCTTCTACGATATTATTACAATAATTTCTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTCAGCCGAGATACAGCTTCCACTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCTCTGGCTTTTGGTCTGGTGTTGACTGGTTTTCTCTTTGCAACCATGTCATTGAGACAAGTTCAATACGATTTTCGACACTTCTTCTTTTCACTAATGTGGGCGGGCATTAGTGTGGGTATAGCAGCATTTGTGAGGGCCAACGGTCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 1785 0.4218 MERADSVQKLYTRMRLWEFPDQFVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIFTIFGVVGMLRLLAGSYLLVITERECVGSYLGHPIFKVSRLKVFPCDNSLKTTPAEQKKIEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYILEVLIDNKLEPYLLPVVQGSFYHFQAAIGIDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLPWQQIVDLTYKPKFELLKPEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGSTMQHVASNDVRYLHFDFHHVCGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDESFKILWANHGDDISTQYSGTPALKGDFVRFGHRTVQGVIQDGCNALLRYYYNNFCDGTKQDAIDLLQGHYIVSVSRDTASTSQKGGLEAIASFPLAFGLVLTGFLFATMSLRQVQYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01186 594 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 9 594 IPR030069 GO:0052866
Cca06g01186 594 ProSiteProfiles Sac phosphatase domain profile. 130 458 IPR002013 GO:0016791
Cca06g01186 594 Pfam SacI homology domain 66 351 IPR002013 GO:0016791
Cca06g01186 594 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 9 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01186 Cca-Chr6 26248920 26258734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01186 1 594 Acyl Lipid Metabolism Gene Families AT3G51460 75.503 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01186 K21797 - gmx:100796999 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01186 06 26248920 26258734 Cca06g01186 06 26248920 26258734 ECH