Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01134 ATGGAGGGCGAGGAAGGAGGAGGCATAAGGCTGAGCAAGCGAATCGCGAACGGAGAAGTCGACTACAAGAACAAATCCGGCACCGCCTGGAGCCACTCCTATCTCAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAACAAACCCACGCCAATCGCCAGCGCCGCGCCGACGAAGTCTCTCGCGAGTTCGCGCAGGAGCAAGAGTTCTTTCGCCAAACCGCTCTCATCTCCAAGAAGGAGAAGGAAAAGGTGGAGCTCATGCAGGCTGTCAGCTTCATGTACGTTCGGCCTCCCGGTTACAACGCCGAGAGCGCCAAAGCTGCTGAGATGAACGATGAGAAGAAAAAAGAGGACATCAGCAACGATGATGGACCTTCCTCTTCCATGCCGCAGAGTTCCTCGCATTTGAATGAAGAGAAGAAGAAACCAAGGCCCAAGGATGTCTTCGGGCGTCCTCTTCCGACAGAAGAGGAATTTGAAGTTCTTAAAAACGCGCCCAGGTTGGAAACAGGAGCTCCTGCCAGGGTCAAACCTTTTGGAGTTGAAGTCCGTAATGTAAAATGTTTAAGATGTGGGAACTATGGTCACCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGTTATAATGCCTAATGAGGAAAGCAGATTGAAAAGAGACGATCCCTTGAATGCTATCCTTGCCCACACAGATCCTACTGAGCCCCTAAAATGGGAGCTCAAGCAGAGGCCAGGAATCAGTCCTCCTCGTGGAGGGTTCAAACCAGATGATCCCAACCAGCAGATAGTTAGTGAGGACATATTTGATGAGTATGGAGGTTTTCTTGGTATGGATAATATACCTGAGTTATTAACCAACTTTTCTAAGAAACCTAAGAAGTCCAAAAAAAGCAAGCACAAAAGGCACCGACAAATAAATTCAGAAAGTGAAGTATCATTAAACGAAGGAGAGAGGAGGTCTAAGAAAAAAAAGGTTAAGGTAAACAAAAAGAAGCAAGGGTCAAGTTCTTCAGAAACTTCGGACTCCGAAGAAGGTCATGGAAAGAGGAGGCACAAGAGTTCCCATTCATCAGAAGATTCTGATAGTTACAGGAATGATCGAAGTAGGTTAAAAGGTTCTGACCAGCCTAGGTGTGGTAGGAGTAAACATGGCAGAAGGTGTTCTTTTTCACCTGAGGAGTCTGATCCGGATGGGTACTGCAGAAGTCACAAGAACAGTGATAAGCTGTGTTATTCATCTGAAGACTCTGACAGGGATGATCGAAGTAGAAAGAATATACAAAAGCATAAGAGGAAGAAAAGACATTCTTATTCACACGAGGAATCTGGTCATGCTGGTGATCATGCTGATAAAAAGAGCAGGAATTAG 1395 0.4681 MEGEEGGGIRLSKRIANGEVDYKNKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRQRRADEVSREFAQEQEFFRQTALISKKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDEKKKEDISNDDGPSSSMPQSSSHLNEEKKKPRPKDVFGRPLPTEEEFEVLKNAPRLETGAPARVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDVIMPNEESRLKRDDPLNAILAHTDPTEPLKWELKQRPGISPPRGGFKPDDPNQQIVSEDIFDEYGGFLGMDNIPELLTNFSKKPKKSKKSKHKRHRQINSESEVSLNEGERRSKKKKVKVNKKKQGSSSSETSDSEEGHGKRRHKSSHSSEDSDSYRNDRSRLKGSDQPRCGRSKHGRRCSFSPEESDPDGYCRSHKNSDKLCYSSEDSDRDDRSRKNIQKHKRKKRHSYSHEESGHAGDHADKKSRN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01134 464 MobiDBLite consensus disorder prediction 243 274 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 350 433 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 312 330 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 116 131 - -
Cca06g01134 464 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 40 75 IPR019339 -
Cca06g01134 464 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 457 IPR040014 GO:0003714
Cca06g01134 464 MobiDBLite consensus disorder prediction 112 185 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 295 464 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 144 173 - -
Cca06g01134 464 MobiDBLite consensus disorder prediction 447 464 - -
Cca06g01134 464 SMART Cir_N_3 39 75 IPR019339 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01134 K06066 - gmx:100788280 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01134 06 25587293 25591185 Cca06g01134 06 25587293 25591185 ECH