Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01131 ATGACTCTTTCCGACGACGAGGACGAGAATCTCGCTCAATTTCTTGAATCAGAAGTCCTCTCCGAGGTATCTGACAAGGAAGAGGAAAATGTGGAGGAACCCAAAGCGAAGAAAAAGCGCGTAGAGGAGGTTGAGAGTACCAAGCTAAAACAAAGTTCTGATTCAGCACCTGTGCCGAAGGACAATGTTGTCAATAATGGGGTGGTGCCGAGAAGGATTGAGACTGGTTCTTTCAGCAAAATTCCACCGGAGCTTTTCCATCATATCCTTAAATTTCTGTCCTCCGAGGACCTTGTTTCTTGTTCGTTAGTCTGTAGGTTTCTGAATTATGCTGCATCTGATGAGGCATTGTGGCGACGCCTGTACTGCATGCGATGGGGCCTTCTCCCCCCTACAAGAAAGCTAAGGGAATGCCCATGGAAAAAGTTATACATTCAGCGTGATGAAGAGGACATGGTCCAACTTGTTAGAAGCTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCACCTCTTCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTGGCTGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTAAATGATACAGTGGTGGCTGGTCATGCTTGTTCTGGGTTTACATGCTCTTTCTACCAAATTGGAGATGTATTTATTTGTGAGAAGACTGGTCAAGTTCATGTTTGCGATGATACATGTAGAGAAGTAGTGTTGGATCCTACAAACTCGCTTTTGGTCTGTACAATATCGGGGCACTGTTTTGATAGATTGGTGTCCCAGTCAGAACTGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGGGATTGATGAGGCAGACGCAGAACCATTTATGGGATCTGGGCGTTTTGCACGAGCTTATTTACTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTAA 981 0.4506 MTLSDDEDENLAQFLESEVLSEVSDKEEENVEEPKAKKKRVEEVESTKLKQSSDSAPVPKDNVVNNGVVPRRIETGSFSKIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDEEDMVQLVRSCQNEFKEYYIQMQAAKRSQAPLPSQLKDDRIILDKTLADQVSSWKSSRGLNDTVVAGHACSGFTCSFYQIGDVFICEKTGQVHVCDDTCREVVLDPTNSLLVCTISGHCFDRLVSQSELEPDAEQQQGGGIDEADAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01131 326 SMART fbox_2 81 121 IPR001810 GO:0005515
Cca06g01131 326 MobiDBLite consensus disorder prediction 28 49 - -
Cca06g01131 326 Pfam UL92 family 222 285 IPR004289 -
Cca06g01131 326 Pfam F-box-like 79 123 IPR001810 GO:0005515
Cca06g01131 326 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
Cca06g01131 326 MobiDBLite consensus disorder prediction 20 63 - -
Cca06g01131 326 Gene3D - 64 152 - -
Cca06g01131 326 PANTHER F-BOX ONLY PROTEIN 3 268 326 - -
Cca06g01131 326 PANTHER F-BOX ONLY PROTEIN 3 68 267 - -
Cca06g01131 326 SUPERFAMILY F-box domain 70 147 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01131 - - gmx:100778591 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01131 06 25567109 25570622 Cca06g01131 06 25567109 25570622 ECH