Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01123 ATGGAAACTCCTCCTAAATACAAATTCACATTGATCCTCTTCATCACCATCTCCCTCTCTCTTGGCTTAGTTTCCTTCACCTTGTGTGTGGTCTCCGAGATTAAGAGGAACAAGAAGGAGGATCTCAGATGGAATGGGAAACTATGTCATTTACCATCAAGTCCAGCATTTGGATTGGGTATTGCATCTTTGGTTAGTTTGGTTTTGGCCCAAAGCATTGGGAATTCTATACTATTCAAGAATTGTTGTTCAGGAGGGAAAAGAAACGCGCAGTATAAGATACCTGTCGTTGCAAGAATTCTACTTTTGATCTCTTGGATTGGCTTTGCAATTGTAGTTATTTTATTAATTGCTACCACAAGCATGAGCAGAAAGCAGCCCTATGGGGAAGGGTGGTTGAATGGTGAGTGCTACCTTGTCAAAGGAGGGGCATACACTGGTTCAGCCATATTGATCCTAGTTACAGTGGGTTCGTTAATTGGTGCAGCTTTGTTAACAATGAAGACCAATCAAGCAGAACAGGGTCAGAAAGTACACGCACAAACGGGGTGA 552 0.4239 METPPKYKFTLILFITISLSLGLVSFTLCVVSEIKRNKKEDLRWNGKLCHLPSSPAFGLGIASLVSLVLAQSIGNSILFKNCCSGGKRNAQYKIPVVARILLLISWIGFAIVVILLIATTSMSRKQPYGEGWLNGECYLVKGGAYTGSAILILVTVGSLIGAALLTMKTNQAEQGQKVHAQTG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01123 183 PANTHER OS07G0462200 PROTEIN-RELATED 10 177 - -
Cca06g01123 183 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 10 177 - -
Cca06g01123 183 Pfam Protein of unknown function (DUF1218) 64 156 IPR009606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01123 Cca-Chr6 25454029 25456025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01123 - - gmx:100779666 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01123 06 25454029 25456025 Cca06g01123 06 25454029 25456025 ECH