Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01122 ATGGAGAACATAACTGTGGGAAGAAGTGGAAGCTCTAGAAAGGGTAGCTTTAGGTTAGGGTTGGGAGTGGATGGAGCAAAAGATCACACTGTGATTGAGCTTGGCAGTATTACTATTGACACACACAAATTTCTTCTAAGCGGTGGAGAGAGAGAGAAGAAATTACACCCTCTCACAAACTCTCTCTCTCCAAGGCAAATGAAATCCCTATCTGCTCTCTGTGACACTATCTTACCTTCTGTTGACAAATTTGTTGATACATCTGATGAATCTGTCACCAAGTTTTATCAAACTTCAGCTTCCATGGCAGGAACACCTCAACGTATTGGGGGTATGATAAGTGAGAAACTGAAACACCCCTTGACAGGGTTAATGAAGTTGGTGTTGTGGCTGTTGTCTACGTGGTTTGGAACATTTATTTTCTGTGGCATGGCCTGTCTCTCAACCAAGTTTCCCTTCATCCATACATATCCTCACTTGCCTATGGACAAACGCCAAGAGATTATGCGATCCTGGTCTCTTAGTTACATTCCTCACTTTAGAATGCTCTTCAGGACCATCAAACTTCTCACTCTCCTTATCTTCTTCACTCAGATAGATGAATCAGAAGACAACGTTTCATGGAAAGCAATTGGATACTGTGGACCCGACCCAGAATTCAAAGCTCAGTTGAATTACCACTTTTTGCATGGAACATCTAAAGCAGAACAAGAGGACAAGGAAGATGAACATGCTGCAGAGGTGATAGGACCCCTTTACAAGGGTCTAGTCCTTCTGAATTACCCACGAGACATCACTGCAGATGCCCTAAGACGATTCGGATTCCCTGTCTCTGTCAATCGAAGAAAGCACAAAGCTGTTCCAAACTTGTCATCTCCTTCTATGGTGATACAATGTGATGCAGTGGTAGTTGGTTCTGGCTCAGGAGGTGGTGTCATAGCTGGTGTTCTAGCAAAGGCTGGTTACAAAGTGTTGGTGTTGGAGAAAGGAGGATATTCCGCTAGGAACAATCTTTCCCTCCTTGAAGGACCAACCATGGAACAAATGTACCTCAATGGTGGCATGGTTGCGAGTGATGACATGGGTATGTTCATTCTCTCAGGGTCCACTGTTGGTGGAGGGTCAGCAATCAACTGGTCTGCATGCATCAAGACCCCTCAGCATGTGTGCAAGGAGTGGTGTGACAAACACGGTCTAGAGTTATTTGAGAGTAAGTTGTATAGAGAAGCCTTGGATGCTGTGTGTGAgaagatgaaggttcaatctgagattgaagatgaaggattcaacaatgcaattttgaggaGAGGGTGTGAGGAAATGGGGTATCCTGTTAGCAACATTCCTAGGAATTCTCCATCAGATCACTACTGTGGCTGGTGTTGCATGGGGTGTAAGGATGGGAGGAAGAAGGGTACATCAGAGACATGGTTGGTGGAGTTGGTGAAATCTGGCAATGGAGCAATTCTTCCAGGGTGTGAGGCAATTAAAGTTTTGCACAAGAAAAAGGAAGGGAGGGATAGAAAGATTGCATGTGGAGTGGCTTTTGAGTTTCAACATAAAGGAAGTAGAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAACACTTAGTACTCCAGCATTGCTCAAAAGAAGTGGCTTAAGGAATAAGAACATAGGGAGGCACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCAAATGCAGGTAGTGCATCCGAGGTGTGGCCAGAGGCATATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCTACTGTTGTTGCAGAGTTTGAACAATCTGGATATGGTGCTGTGATCCAAACACCTGCATTGCATCCTGGTATGTTCTCAGTTGTCACGCCATGGACTTCCGGAACTGATATAAGAGATAGAATGCGGAAGTTTCCTAGAACAGCTCATATATTTGCGCTGGCAAGGGACCAAGGATCAGGGACAGTGGAATCGCCAAACCGAATCAGTTATCAGATGGCAAATGCAGATGAAGAGAGTTTAAAGAAGGGAATTGAGAAGGTGCTGAGAATTCTGGCAGCAGCTGGAGCTGAAGAAATAGGGACACATCATAATAAGGGAAGGACCTTAAATGTGAAGCAAGTGAGCTATAATGAATTTGAGAAATTTGTTAAGGAGGAAAGTTCAAGGCCATTGAGAGATCTTTCAACACCATTGTGTTCAGCACATCAGATGGGGAGTTGCAGGATGGGTTGTAATGCCAAGCAATCAGTGGTGAATCAAACAGGAGAGACCTGGGAAGTGGAGGGCCTTTATGTGGCAGATGCAAGTGTTTTCCCCACAGCTTTGGGGGTGAATCCAATGGTTACTGTTCAAGCTATTGCTTATTGCACAGCACAGTCTGTTGTTGAAGTTCTTAGAAGGAAAAGAAGCAAATGA 2436 0.436 MENITVGRSGSSRKGSFRLGLGVDGAKDHTVIELGSITIDTHKFLLSGGEREKKLHPLTNSLSPRQMKSLSALCDTILPSVDKFVDTSDESVTKFYQTSASMAGTPQRIGGMISEKLKHPLTGLMKLVLWLLSTWFGTFIFCGMACLSTKFPFIHTYPHLPMDKRQEIMRSWSLSYIPHFRMLFRTIKLLTLLIFFTQIDESEDNVSWKAIGYCGPDPEFKAQLNYHFLHGTSKAEQEDKEDEHAAEVIGPLYKGLVLLNYPRDITADALRRFGFPVSVNRRKHKAVPNLSSPSMVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSARNNLSLLEGPTMEQMYLNGGMVASDDMGMFILSGSTVGGGSAINWSACIKTPQHVCKEWCDKHGLELFESKLYREALDAVCEKMKVQSEIEDEGFNNAILRRGCEEMGYPVSNIPRNSPSDHYCGWCCMGCKDGRKKGTSETWLVELVKSGNGAILPGCEAIKVLHKKKEGRDRKIACGVAFEFQHKGSRDICVVESKVTIVACGTLSTPALLKRSGLRNKNIGRHLHLHPVTMAWGYFPNAGSASEVWPEAYKKSYEGGIMTAMSTVVAEFEQSGYGAVIQTPALHPGMFSVVTPWTSGTDIRDRMRKFPRTAHIFALARDQGSGTVESPNRISYQMANADEESLKKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYNEFEKFVKEESSRPLRDLSTPLCSAHQMGSCRMGCNAKQSVVNQTGETWEVEGLYVADASVFPTALGVNPMVTVQAIAYCTAQSVVEVLRRKRSK 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01122 811 Gene3D - 724 808 IPR036188 -
Cca06g01122 811 Pfam GMC oxidoreductase 300 566 IPR000172 GO:0016614|GO:0050660
Cca06g01122 811 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 17 811 - -
Cca06g01122 811 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 17 811 - -
Cca06g01122 811 Gene3D - 285 606 IPR036188 -
Cca06g01122 811 PIRSF Lg_Ch_AO 50 811 IPR012400 GO:0046577
Cca06g01122 811 Pfam GMC oxidoreductase 667 796 IPR007867 GO:0016614
Cca06g01122 811 SUPERFAMILY FAD/NAD(P)-binding domain 295 807 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01122 Cca-Chr6 25441653 25451250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01122 50 805 Acyl Lipid Metabolism Gene Families AT4G19380 57.916 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01122 K17756 - gmx:100775376 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01122 06 25441653 25451250 Cca06g01122 06 25441653 25451250 ECH