Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01119 ATGCCCTCCCACCGCGACCACGGCCACGCGGCCGAGCACCACCAGCCCAGGCTCAGAAGAAGACTCGTCAACACCCACCACAGCGCCAACACGCACCCCTTGATCTGGCTCGCCGCCATCCTCTGCACCGTCATCGCCATCGGCGTTGTCATAGCCGGCATAGTTGTCTTCGTGGGCTACGTCGTCATCCACCCCAGAATCCCCGTCATCAGCATCACCAACGCCCACCTCGACCTCCTCAGCAACGACTACGCCGGCCTCCTCCAGACGCAGCTCACCATCATGGTCCTCGCGCAGAACGGCAACGCCAAGGCGCATGCCACCTTCTCCGACGTCCGCTTCAACCTCAGCTACCAGGGCCAGGCCATCGCCGTCATGGTCGCCGGCATCATCGAGGTCCCCAAGAACAGCTCCCAGACGCTGCGCTATGTCGTTCAGAGTAAGTCAATCCCGTTGACTCCCGAACAGATGGAGGAGGTGGACCAGTCGTGGAAGCGTGACATCATCGGCTTCGACGTTAAGGGAAGCGCCAGGACGCGGTGGAGGGTAGGGCCCTTAGGTTCGGTTAGGTTCTGGTGCAACTTGGAGTGTCAACTCAGGTTTCACCCTTCCAATGGGAGTTACATTAAACACTCCCGCTGCACCTCCGAGTCCAAATGA 660 0.6061 MPSHRDHGHAAEHHQPRLRRRLVNTHHSANTHPLIWLAAILCTVIAIGVVIAGIVVFVGYVVIHPRIPVISITNAHLDLLSNDYAGLLQTQLTIMVLAQNGNAKAHATFSDVRFNLSYQGQAIAVMVAGIIEVPKNSSQTLRYVVQSKSIPLTPEQMEEVDQSWKRDIIGFDVKGSARTRWRVGPLGSVRFWCNLECQLRFHPSNGSYIKHSRCTSESK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01119 219 Pfam Late embryogenesis abundant protein 97 197 IPR004864 -
Cca06g01119 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 219 - -
Cca06g01119 219 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 12 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01119 Cca-Chr6 25382658 25383528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01119 - - gmx:100787678 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01119 06 25382658 25383528 Cca06g01119 06 25382658 25383528 ECH