Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01107 ATGAGTTCCACACCAGCATTTCCTAAGTTCGTTTCCGTGGAAGGCGCCGATATTCATTCCAGAAGTAAACCTGACGGCTTCAGATTCAGTCTTGTCTCGTATAACATATTGGCTCAGGCTTATGTGAAGAGCGCGTTGTTCCCACACTCTCCTTCCTCGTCTCTCAAATGGAAACTTCGTTCGAACACAATTTTGGCAGTTCTCAAGAACTTGGGAGCTGATATTTTCTGCTTACAGGAAGTTGATGAATTTGAAAGCTTTTACAAAGGAAACATGCTGGACCTAGGATATTCTTCTATTTATATGAAGAGAAGTGGTCAAAAGCGTGATGGGTGTGGTTTATTTTACAAGCATGACCGTGCAGAGTTGGTTTTAGAGGAGAAAATTGAATACAATGATCTTGTGAAGTCAGTTCCCGATGGGAACACTTCAAATGATAATGAACACACCAATATCCAGACAGTCCAGCCAGATAAACAAAAGGACGTGGTACCCAAAAATGGATCTAAATCGAATACAGAAGATCGTGGAGATCCCAATGATCCTCATGTGAGACTAAAGCGTGATTGTGTTGGAATTATGGCTGCATTCAAACTCAAAGGTCCCTCTTGTCATATTGTTATTGTGGCTAACACTCATCTTTATTGGGATCCTGAATGGGCTGATGTCAAGCTTGCACAAGCTAGATATCTTCTATCTCGCTTAGCAAAATTTAAAACACTGGTATCAGATAGATATGGATGCATACCTGAAGTCATTGTGGCTGGTGATTTCAATTCTACTCCAGGAGATATGGTCTATCAGTACCTTGTATCAGGCAATCCTTCATCAAACTTGATGCCGAACTGTTTAGAGGAGTCTCCTATTCCCTTATGTAGTGTCTATGCTTCTACAAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACACTCGACTATATATTATTTTCCCCTACTGATCGCATTAAACTAATTAGTTTTCTCGAGCTTCCAGACTCCGACACAGCTGATATTGTTGGTGGACTGCCAAACTTCAGTTATCCAAGTGATCATCTACCAATTGGTGCTGAATTTGAAATCATCAAGGAATAA 1104 0.4094 MSSTPAFPKFVSVEGADIHSRSKPDGFRFSLVSYNILAQAYVKSALFPHSPSSSLKWKLRSNTILAVLKNLGADIFCLQEVDEFESFYKGNMLDLGYSSIYMKRSGQKRDGCGLFYKHDRAELVLEEKIEYNDLVKSVPDGNTSNDNEHTNIQTVQPDKQKDVVPKNGSKSNTEDRGDPNDPHVRLKRDCVGIMAAFKLKGPSCHIVIVANTHLYWDPEWADVKLAQARYLLSRLAKFKTLVSDRYGCIPEVIVAGDFNSTPGDMVYQYLVSGNPSSNLMPNCLEESPIPLCSVYASTRGEPPFTNYTPGFTGTLDYILFSPTDRIKLISFLELPDSDTADIVGGLPNFSYPSDHLPIGAEFEIIKE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01107 367 MobiDBLite consensus disorder prediction 163 183 - -
Cca06g01107 367 PANTHER BNAC08G09040D PROTEIN 5 366 - -
Cca06g01107 367 SUPERFAMILY DNase I-like 28 364 IPR036691 -
Cca06g01107 367 Gene3D Endonuclease/exonuclease/phosphatase 6 367 IPR036691 -
Cca06g01107 367 MobiDBLite consensus disorder prediction 137 160 - -
Cca06g01107 367 MobiDBLite consensus disorder prediction 136 183 - -
Cca06g01107 367 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 5 366 - -
Cca06g01107 367 Pfam Endonuclease/Exonuclease/phosphatase family 32 355 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01107 Cca-Chr6 25200929 25205306 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01107 K12603 - gmx:100775932 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01107 06 25200929 25205306 Cca06g01107 06 25200929 25205306 ECH