Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01099 ATGTCACTGCAAACTACTTACAAGTCAGAAGCGATGAAAGAAAGAAGCTCAGAATCCGCGGTGTTACTTTTCATCTCAGTTGCATTCATTCTTATCTGGAATTATAATGAAAGAGTAACCTCTTTCTCTCTCTACAAAGACCCAGCCTCTTTCTTTTCTAGCTGCAGTAGGAGAATGGATGCTATaaggaagcaagcaagcaagttaagggagcaagTTGCCAGGCAACAACAGGCAATACTAAGGCAGTTGGGGCAAATTAGCAATGAACCGCTTATGACTGATGAATCTGAAATTGAATGTCATCAGCAACTTCAAAAGTTATACACTTCTACGAAGACAGCTAAGCATTTTCAGCGGCATATTGTTCGTGCTATAGAAGGTTTCATTTCTGTTAGCTCCAAGCAGATGGAGATAGTGAGGAAGTTGGCTAAGGACTGCTGTAAGTATGGGACTGAGAATCAAGGTAGTACTTACCCCCTCGCAAGGGCTTCTCTTCAATTTGGTAGCTCATACGATATATCGGAAAATGAGAGGGAGACTTTGCTTGGGATCTTAGGTGATCAGATCTCTGAGCCACTGCGGGCACAGATAACAGGAGCTCCTTTGGAGGATGCACGCCATCTCACTCACCGCTATGACAAACTTCATCAAGAAGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGGTCAAAGTTGAGGAATTCTTCTGTTTCTGCAGAGAGTTCTGTGAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAACTTAAATCTGCCTTGGCAGCACTTGGTAGAGAAGCAACTGCAGCTATGTTGTCCGTTGAAGAACAACAGCAACAGATGACTCTCCAGAGCCTTCGTACAATGGTGGATGCTGAGAGAGCCTATCATCAGCATGTCCTAGTTATTCTTGAGAAACTATATGCTGAGATAATTGATGAGAGACAACCAAAAGAGGCTACATCATTTCCACTGCCAAGAGATGGACTTAATCAACCTGCGGATGAGAATGCTAATTCAAATGGCTTTGAATATAAACACAACAGTCCAACAGCCACATACTTTTTTGCAAAGGTCGTACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTCTATCTGTTGATGATTTTGTTGTAGTTCGTCAGATTGGTCCTAATGGATGCCAGCAAGATAACAGAATAATGTCACGTACCAAGATTGCCCTTTTGATTAGGATGGACTGTAATTTCTAA 1239 0.4149 MSLQTTYKSEAMKERSSESAVLLFISVAFILIWNYNERVTSFSLYKDPASFFSSCSRRMDAIRKQASKLREQVARQQQAILRQLGQISNEPLMTDESEIECHQQLQKLYTSTKTAKHFQRHIVRAIEGFISVSSKQMEIVRKLAKDCCKYGTENQGSTYPLARASLQFGSSYDISENERETLLGILGDQISEPLRAQITGAPLEDARHLTHRYDKLHQEVEAQAAEVLRRRSKLRNSSVSAESSVRLQNAETRLKELKSALAALGREATAAMLSVEEQQQQMTLQSLRTMVDAERAYHQHVLVILEKLYAEIIDERQPKEATSFPLPRDGLNQPADENANSNGFEYKHNSPTATYFFAKVVHPFDAQAEGELSLSVDDFVVVRQIGPNGCQQDNRIMSRTKIALLIRMDCNF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01099 412 Coils Coil 59 79 - -
Cca06g01099 412 PANTHER SH3 DOMAIN-CONTAINING 59 392 - -
Cca06g01099 412 SUPERFAMILY BAR/IMD domain-like 100 312 IPR027267 -
Cca06g01099 412 MobiDBLite consensus disorder prediction 320 339 - -
Cca06g01099 412 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 59 392 - -
Cca06g01099 412 Gene3D Arfaptin homology (AH) domain/BAR domain 90 322 IPR027267 -
Cca06g01099 412 Coils Coil 217 237 - -
Cca06g01099 412 Coils Coil 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01099 Cca-Chr6 25074945 25083641 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01099 - - gmx:100816554 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01099 06 25074945 25083641 Cca06g01099 06 25074945 25083641 ECH