Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca06g01097 | ATGACGCGAGGAAAGCAGAAGATCGAAGCGCAGAAGCGAAACGCAGAGAAGAATCAGAAGGCAAAGGGCTCTCAGCTCGAGGCCAGAGCCGTTGGCCTTAAAGTCATCTGCCCCATATGCAAGGTCCAACTTGCAAACCAAAACCAACTTGGTGATCATTATACCTCCAAACATCCGAAGGAGAATCCCCCTTCAGATTCAAGCTAG | 207 | 0.4976 | MTRGKQKIEAQKRNAEKNQKAKGSQLEARAVGLKVICPICKVQLANQNQLGDHYTSKHPKENPPSDSS | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca06g01097 | 68 | Gene3D | - | 1 | 66 | IPR026939 | - | |
| Cca06g01097 | 68 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cca06g01097 | 68 | Pfam | Zinc-finger of C2H2 type | 37 | 57 | - | - | |
| Cca06g01097 | 68 | Pfam | 4F5 protein related disordered region | 1 | 28 | IPR007513 | - | |
| Cca06g01097 | 68 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 37 | 58 | IPR013087 | - | |
| Cca06g01097 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | IPR045230 | - | |
| Cca06g01097 | 68 | SUPERFAMILY | Expressed protein At2g23090/F21P24.15 | 1 | 64 | - | - | |
| Cca06g01097 | 68 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Cca06g01097 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca06g01097 | - | - | ming:122068724 | 127.102 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca06g01097 | 06 | 25051601 | 25055117 | Cca06g01097 | 06 | 25051601 | 25055117 | ECH |