Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01091 ATGATCGAAGAAGCACTAGTGTTGTGTAGCTGTTTCAGCTTCACCAAAGTTGGTGTCGTTCAATCACCATCGTCGGTGTTCCTTTCTCCACTTCACCATCGTCGTCTTCTTCGGAACGCGCCGTTTTCATCTCCGATTACCGCTCCCAGAAGAAAGGAGTTTCGTGAGAAGCTTGTGTCCAAAATGGCTAACTATGAGGGACAAACGGTTGCCAGTGGTAGTGAAGTCAGATCAGGGAATATGATTTATCGGCCTATTTTGGAAGATGGAGTGTTCCGTTTTGATTGTTCCGGAAATGATAGGGATGCAGCGTATCCCAGTATTTCTTTTGTGAATAGCAGGGATAGAGACACACCTATCACTACTAACAAAGTTCCTTTATATACCCCAACGTTTGAGTGCCTTTTAGAGCAGCAGGTTGTCAAACTTGAGCTGCCTGTGGGTTCCTCCCTTTACGGTACTGGAGAAGCTAGTGGAGAGCTTGAGAGGACAGGCAAAAGAGTGTTCACATGGAACACGGATGCATGGGGTTATGGACCTGGAACTACATCCTTGTACCAGTCACATCCATGGGTGTTAGCTGTTCTTCCAAATGGTGAGGTGCTAGGAATCCTTGCCGACACTACAAGGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACAGTTTGTCTCTGCATCCTCATATCCTGTCATTACATTTGGTCCTTTTGCTTCGCCCACAAAAGTGTTGATATCTCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGCTATCACCAATGTCGTTGGAGTTATTTATCTGACCAGAGAGTTCTGGAGGTTGCAAAAACATTCCGGAAAAAGTGCATACCTTGTGACGTGATATGGATGGATATCGACTACATGGATGGTTTTCGTTGTTTCACCTTTGACAAGGCATATCCCAAGTCTTTAGTGACAGATCTGCATTATAATGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATCAAGCAGGAAGAGGGTTATTTTATATATGATAGTGGTTCTAAAAATGATGTTTGGGTCCAAAAGGCAGATGGAACTCCTTATGTTGGTAATGTGTGGCCTGGGCCATGTGTCTTCCCTGACTACACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAACGAACCAGCTATCTTTAAGGTTGTAACAAAAACAATGCCTGAGAGCAATGTTCATAGAGGAGATGATGAACTTGGAGGTCGTCAGAATCATTATTTCTATCATAATGTATATGGTCTACTGATGGCAAGATCAACCTATGAAGGCATGAGACTAGCTAATGAAAAGAAGCGTCCTTTTGTTCTCACTAGAGCTGGATTTTCTGGCAGCCAAAGGTATGCTGCAACATGGACCGGAGATAATCTTTCTACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCGCTTTCAGGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAGACTTTTTGGAAGGTGGATGGGTGTAGCTTCCTTGTTTCCCTTTTGCCGAGGGCATTCTGAAGCTGGCACCACTGACCATGAACCTTGGTCTTTTGGTGAAGAGTGTGAAGAAGTTTGTCGATTAGCACTGAAGAGACGCTACCGCCTGATCCCACTTATTTACACTCTTTTTTATTTTGCCCATACAAGGGGCTTTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCATTTTTGCTTGGTCCAGTCTTGGTGTATGCAAGCACCTTACCTAGACAGGGGTTGGACAAATTGGAGATTACTTTGCCTAAGGGGATATGGTTGAATTTTGATTTCAATGATACACATCCGGATTTGCCAGCTTTATACTTGAAAGGTGGTTCAATTATTCCTGTGGGACCCCCTCTTCAGCATGTCGGAGAAGCTAATCCATCAGATGACTTGACTCTTCTTGTGGCTTTAGATGAATCTGGGAAAGCTGAAGGTGTTGTATTTGAGGATGATGGTGATGGATATGAATTCACAAAAGGCAATTATTTGTTAACACATTATGTGGCTGAACTTAAATCATCAGTTGTTACTGTGAGTGTACACAAAACTGAAGGATCATGGAAAAGACCTAATCGCCACCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGATGTTCTGCAACTAATTTTGCCTTCGGAAGAGGAGGTGTTGAAGCTAGTATCTACCAGTGAGAAGCAATACAAGGACCGTTTGGAAAACACCACTCCAATTCCTGACGGAGAAGAGGTTTCTGGACCCAAGGGAACAGAGCTTTTAAAAACTCCCATTGAACTGAAAAGTGGTGAGTGGAATCTTAAAATTGTTCCCTGGATTGGGGGTAGAATCATCTCCATGACACACATTCCTTCAGGAACACAATGGCTCCATAGCAGGATTGAGATCCATGGGTATGAGGAGTATAGTGGTATGGAGTATCGTTCTGCTGGGTGTTCTGAGGAATACTCTGTTATTGATCGAGAACTTCAGCATGCTGGGGAGGAGGAATCTGTGGTATTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAACGGCAAATCTATGTTCCAAAGAATGTTGCCAATATCTTCCAGATAGACTCTAGTATAGTAGCCCGCAGTGTTGGCGCTGGTTCTGGAGGGTTCTCAAGGTTGGTTTGCTTGAGAGTTCACCCATCATTCACTCTTTTGCACCCATCTGAATCTTTTGTTTCATTTACTTCAATCGATGGATCCACACATGAGGTCTTTCCTGATGGTGGGGAGCAATGCTTCGAAGGAAACCTCATTCCTAATGGTGAGTGGAGGCTCATTGACAAATGCCTTGGCTTGGCACTGGTCAACCGATTTAACGTTAGTGAGGTATTCAAGTGTCTTGTTCATTGGGATAGTGGAACTGTCAACCTGGAGCTTTGGTCCGAAAGTAGGCCTGTTTCAAAGCAATCCCCTCTCAGAATTTCCCATCAGTACGAGGTTATAAGAATTCCATAA 3156 0.436 MIEEALVLCSCFSFTKVGVVQSPSSVFLSPLHHRRLLRNAPFSSPITAPRRKEFREKLVSKMANYEGQTVASGSEVRSGNMIYRPILEDGVFRFDCSGNDRDAAYPSISFVNSRDRDTPITTNKVPLYTPTFECLLEQQVVKLELPVGSSLYGTGEASGELERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEVLGILADTTRRCEIDLRKESTIQFVSASSYPVITFGPFASPTKVLISLSKAIGTVFMPPKWSLGYHQCRWSYLSDQRVLEVAKTFRKKCIPCDVIWMDIDYMDGFRCFTFDKAYPKSLVTDLHYNGFKAIWMLDPGIKQEEGYFIYDSGSKNDVWVQKADGTPYVGNVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDDELGGRQNHYFYHNVYGLLMARSTYEGMRLANEKKRPFVLTRAGFSGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVASLFPFCRGHSEAGTTDHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGFPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTLPRQGLDKLEITLPKGIWLNFDFNDTHPDLPALYLKGGSIIPVGPPLQHVGEANPSDDLTLLVALDESGKAEGVVFEDDGDGYEFTKGNYLLTHYVAELKSSVVTVSVHKTEGSWKRPNRHLHIQLLLGGGAMLDTWGTDGDVLQLILPSEEEVLKLVSTSEKQYKDRLENTTPIPDGEEVSGPKGTELLKTPIELKSGEWNLKIVPWIGGRIISMTHIPSGTQWLHSRIEIHGYEEYSGMEYRSAGCSEEYSVIDRELQHAGEEESVVLEGDIGGGLVLQRQIYVPKNVANIFQIDSSIVARSVGAGSGGFSRLVCLRVHPSFTLLHPSESFVSFTSIDGSTHEVFPDGGEQCFEGNLIPNGEWRLIDKCLGLALVNRFNVSEVFKCLVHWDSGTVNLELWSESRPVSKQSPLRISHQYEVIRIP 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01091 1051 PANTHER ALPHA-GLUCOSIDASE 78 1048 - -
Cca06g01091 1051 CDD GH31_N 141 253 - -
Cca06g01091 1051 Pfam Galactose mutarotase-like 150 215 IPR025887 -
Cca06g01091 1051 ProSitePatterns Glycosyl hydrolases family 31 active site. 401 408 IPR030458 -
Cca06g01091 1051 Gene3D - 663 789 IPR013780 -
Cca06g01091 1051 SUPERFAMILY Glycosyl hydrolase domain 592 652 - -
Cca06g01091 1051 Gene3D Glycosidases 256 574 - -
Cca06g01091 1051 Gene3D glycosyl hydrolase (family 31) 103 236 - -
Cca06g01091 1051 Pfam Glycosyl hydrolases family 31 240 666 IPR000322 GO:0004553|GO:0005975
Cca06g01091 1051 Gene3D - 575 658 IPR013780 -
Cca06g01091 1051 SUPERFAMILY (Trans)glycosidases 250 590 IPR017853 -
Cca06g01091 1051 CDD GH31_glucosidase_II_MalA 253 590 - -
Cca06g01091 1051 SUPERFAMILY Galactose mutarotase-like 140 220 IPR011013 GO:0003824|GO:0005975|GO:0030246
Cca06g01091 1051 PANTHER BNAA01G23630D PROTEIN 78 1048 - -
Cca06g01091 1051 Pfam Domain of unknown function (DUF5110) 684 751 IPR033403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01091 Cca-Chr6 24985700 24998709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01091 75 1051 Glycoside Hydrolase AT3G23640 73.061 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01091 - - gmx:100809690 1909.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01091 06 24985700 24998709 Cca06g01091 06 24985700 24998709 ECH