Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01071 ATGGAAATGGAAGGGAGGGGGTTTTCTGGCTTATACAAGAATTCAAGTGAGGAGTTGTTCCTGAAGACAGTGATGGAGAGCCCTATTGGTATGCCAGTGCCTACCATGGAGATGTTAGGTTTCAAGGCTGTTTCTCAAAGCTTTCGCACAGATAGTGAGGAGCTCTTTAAGCGTTGGCTAACAAATGGAGAGGGATACAATTCATCAAGCGTGGGACTGAACAGTCGATTATCAAAGAGGATTTCCACCGAACTAGCTAATACTGTATCTAACCAGCAACATGTTGGTGTAGCTTCAGAGGGAAGAAACAATGAAAAATTATACATGCAAAATAACCTTTTGGCCAATGATGTTTCAGATGATATCAATTTTTCGACCAGAGACCCTGTTAATAGAGAACTGCAATCTAGTAGTGACCTGTTTCTGGCCAAGGCCTGGTTTCTTAGTGATCAAAGAGTAACAAGAAGCCGGTCCTCTGAATTGCGGCGGAGGTATACTGAAATGCAAAATGCTCAAACAAAACAGGGAATGGAAATTATGAGCATAACCCCTCAGCATGTTGTGGACACTACAAAACAAGAAAATGCAAATTTAAATGGTTTTGATTACATGGCTATGTATGAGCTTCCAAGCCAAAAGGGGTCATTCATGTCTCCATCCAACTCATCTTCATCTACCTTCTACACTCATCAAGTGGTTGATGCAGATAAAGTCTCATCTTGTGTAAGTATGCTAAAGGGTACATTACAACGCAAGAAACTCGGCAACCAAATTGAGAAAGAAGCTGCAGGAGATAGTTCAAATGGACTTTTTTGTGCTCAAGAACCTCTTTTCCAAACTGGTTTCAATGAAGGACAAGAAAATTGGAGTCATCAAAAGCCAATAAATGTTCATGGAGCCTGTAATACTCAAATTAATGATCCTGGTGTTTACTTTGTCTTAGATGGTTTTGCAAATCAGAAGAACCAAGCATATGTAGGAACTGCTTCCCGAGAACCATCTCAAAGTGAATCATCTGCTGCTGCACCAGTAATCTCCTCCGGTTTGGATGCATGTGAAGGTCCCAGCAATTCAAATCAAAATCTTTGTGAAAGCTCATGGAAGCAAGTGGGAGTGAGTAGAAGTTCAGAAAACGCTCAAAATAGAGTCAAAGGTGTTAGAGAACAGATAATGGATAATATAAAAGATGACCGGAAGAGGAGAAGTCTAGAAAGATATGGATCTATAACATCAGCTGTTTCAGAGGAGAAGGGAGACAGCACAAAAAAGCGTAGAGTGGAGCGCTCGAGGAAAATGGCTGAGGCAAAGGAAAGAAATTTGACACCATCAGTTCCCTCTGATATGCAAGCTGTCTTGAAGCGATGTGAAACCCTTGAGAAGGAAGTTCGATCACTCAAACTTAATTTGTCTTTCATGAATAGGAAGGATTCTGAACAAACAAAGCAGATAGAGGACCTTCAGAAGCAAAAGGAAGACTTAGCAGATGAGAAAGAGCGCCTACTAGAAGAGATTGAGAGAATTCTTTCAGATACTGGAAAGATCTAA 1545 0.4084 MEMEGRGFSGLYKNSSEELFLKTVMESPIGMPVPTMEMLGFKAVSQSFRTDSEELFKRWLTNGEGYNSSSVGLNSRLSKRISTELANTVSNQQHVGVASEGRNNEKLYMQNNLLANDVSDDINFSTRDPVNRELQSSSDLFLAKAWFLSDQRVTRSRSSELRRRYTEMQNAQTKQGMEIMSITPQHVVDTTKQENANLNGFDYMAMYELPSQKGSFMSPSNSSSSTFYTHQVVDADKVSSCVSMLKGTLQRKKLGNQIEKEAAGDSSNGLFCAQEPLFQTGFNEGQENWSHQKPINVHGACNTQINDPGVYFVLDGFANQKNQAYVGTASREPSQSESSAAAPVISSGLDACEGPSNSNQNLCESSWKQVGVSRSSENAQNRVKGVREQIMDNIKDDRKRRSLERYGSITSAVSEEKGDSTKKRRVERSRKMAEAKERNLTPSVPSDMQAVLKRCETLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQKEDLADEKERLLEEIERILSDTGKI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01071 514 MobiDBLite consensus disorder prediction 416 437 - -
Cca06g01071 514 MobiDBLite consensus disorder prediction 394 441 - -
Cca06g01071 514 Coils Coil 448 510 - -
Cca06g01071 514 PANTHER PROTEIN CYCLOPS 1 513 IPR040036 GO:0005634|GO:0036377|GO:0043565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01071 - - gmx:100811742 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01071 06 24788875 24794479 Cca06g01071 06 24788875 24794479 ECH