Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01067 ATGAAGCATAAAGATGGAAAACCAATCAACCAGCCAAACAAGAACCGGGCTGTGACTTTGGCTGTCACGGTCATTGCTCTATGCGGCTTTTCTTTCTATCTGGGAGGAATCTTTTGTTCTGGGAAGGATGGGGTTGTGGTCAATACCATTCAGAAGACCCTTGAATCTCCTAAGCAAATCTCAGGTTCCCTGCAAATTAAGCCCATCAGTTTCCCTGAATGCGGAATAGATTATCAAGACTACACCCCATGCACAGATCCAAAGAGATGGAGAAAGTATGGCACGTATCATCTTACTTTGTTAGAACGCCATTGCCCTCCAATTTTTGAGAGGAAAGAATGCTTGGTTCCTCCACCAAATGGATACAAGCCTCCTATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGACTGGATCAACACACAGAAGTCTAATCAGCATTGGTTGAGAAAGGAAGGGGATAAATTTCTATTTCCAGGTGGGGGTACTATGTTCCCCAATGGTGTTGGTGAATATGTTGATTGGATGCAAGATCTGATCCCAGAAATGAAAGATGGGACTGTGCGCACTGCCATTGATACTGGTTGTGGGGTTGCTAGCTGGGGTGGTGATTTGTTGGATCGTGGGATTCTAACAGTTTCTCTTGCTCCAAGAGATAACCATGAAGCTCAGGTTCAATTTGCTCTAGAGCGTGGTATCCCAGCTGTTCTTGGCGTCATTTCTACACAAAGACTTCCTTTCCCATCAAACTCCTTCGATATGGCTCATTGCTCCAGATGCCTTATCCCATGGACAGAATTTGGTGGTATTTATCTCATGGAAATAAGCCGTATTCTTCGTCCTGGAGGATTTTGGGTTTTGTCTGGTCCACCTGTCAACTACGAGCGCAGGTGGCGTGGATGGAACACAACTGTGGAAGAGCAAAGATCAGATTATGAGAAATTACAGGATTTACTCACTTCAATGTGCTTTAAATTGTACAACAAAAAGGATGACATTGCTGTATGGCAGAAGGCTAAAGATAACAGTTGCTATGACAAGTTGTCTAGAGAGATCTATCCACCAAAGTGTGATGACAGCCTTGAACCAGATGCAGGATGGTACACTCCACTTCGTGCTTGTTTTGTGGTTCCAGATCCAAAACACAAGAAATCGGGCCTCACATCCATGCCTAAGTGGCCTGAGAGGTTGCATGCTACCCCTGAAAGGGTCACATCTGTTCAGGGTACTAGTACTAGTAGTTTCAGTCATGATAGTGGCAAATGGAAAAAGCGCATTCAGCACTACAAGAAGTTGCTTCCTGAACTTGGCACTGACAAGATAAGAAATGTCATGGACATGAATACAGTGTATGGAGGTTTTGCTGCAGCCTTGATCAATGATCCCTTGTGGGTCATGAATGTGGTTTCATCTTATGGTTCCAACACACTCCCTGTGGTTTTTGATAGAGGCCTTATTGGAATCTTCCATGACTGGTGTGAAGCTTTTTCAACATATCCTAGAACATATGATCTCCTTCATCTTGATGGACTCTTCACTGCAGAAAGCCACAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGACCGGATTTTAAGACCTGGTGGGCATGCTATCATTCGAGAGTCCACTTATTTTGTGGATGGCATTGCAACTATTTCCAAGGGTTTGAGATGGATATGCCACAAAGAAAACACCGAGTATGGAGTTGACCAAGAGAAGATTTTGATATGCCAGAAAAAGCTATGGCATTCATCCAACAAAGGTTCAAGATGA 1794 0.4365 MKHKDGKPINQPNKNRAVTLAVTVIALCGFSFYLGGIFCSGKDGVVVNTIQKTLESPKQISGSLQIKPISFPECGIDYQDYTPCTDPKRWRKYGTYHLTLLERHCPPIFERKECLVPPPNGYKPPIRWPKSRDECWYRNVPYDWINTQKSNQHWLRKEGDKFLFPGGGTMFPNGVGEYVDWMQDLIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAVLGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLMEISRILRPGGFWVLSGPPVNYERRWRGWNTTVEEQRSDYEKLQDLLTSMCFKLYNKKDDIAVWQKAKDNSCYDKLSREIYPPKCDDSLEPDAGWYTPLRACFVVPDPKHKKSGLTSMPKWPERLHATPERVTSVQGTSTSSFSHDSGKWKKRIQHYKKLLPELGTDKIRNVMDMNTVYGGFAAALINDPLWVMNVVSSYGSNTLPVVFDRGLIGIFHDWCEAFSTYPRTYDLLHLDGLFTAESHRCEMKYVLLEMDRILRPGGHAIIRESTYFVDGIATISKGLRWICHKENTEYGVDQEKILICQKKLWHSSNKGSR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01067 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 423 567 IPR029063 -
Cca06g01067 597 PANTHER PMT16, PUTATIVE-RELATED 1 595 - -
Cca06g01067 597 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 595 IPR004159 GO:0008168
Cca06g01067 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 326 IPR029063 -
Cca06g01067 597 Gene3D Vaccinia Virus protein VP39 169 350 IPR029063 -
Cca06g01067 597 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 80 586 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01067 Cca-Chr6 24746204 24751320 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01067 - - gmx:100810681 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01067 06 24746204 24751320 Cca06g01067 06 24746204 24751320 ECH