Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01053 ATGGAAAAGAGCAAAGTGCTTATTGTTGGCGGAACTGGGTACATTGGAAAAAGGATGGTAAGGGCATCTTTGGCTCAGGGACATGAAACTTTTGTCCTTCACAGGCCTGAGATTGGGGTTGACATTGAGAAAGTTCAGCTTCTCTTGTCATTCAAGGAACAAGGGGCTAGGCTCGTATCAGGCAGCTTTCAGGATCATCAGAGCCTAGTGAATGCTGTCAAACTAGTTGATGTTGTCATTTGTGCTATATCTGGTGTTCACATTCGCAGCCACCAAATCCTCCTCCAACTTAAACTCGTTGATGCCATAAAAGAAGCTGGAAATGTTAAGAGATTTTTGCCTTCTGAGTTTGGGACTGATCCTGCAAGAATGTCGCATGCATTGGATCCCGGAAGAGTTACATTTGACGACAAAATGGTAATAAGAAAAGCCGTTGAAAAGGCTGGCATACCATTCACTTATATCTCTTCTAATATTTTTGCTGGTTACTTCCTTGGTGGGCTGTGTCAACCTGGTTTCCTAATCCCCTCTACAGAGTCTGTGGTCTTGTTTGGTGATGGAAATGTAAAGGCAATCTTTGTGGATGAAGATGATATAGCTATGTACACTATCAAAACCATAGATGACCCCAGAACTCTGAACAAGACAGTGTACATAAGGCCACCTAAAAACATATTATCCCAGAGAGAGGTTAAACTGATTTGGAAAGAGTTGCAGAAATCTTCAATTTCAGAAGAACAGTTTTTGAGTTCCATGGGAGGGCAATCATATGCGCAGAGCGTGGCAATGGTCCATTACTACCATATTTGCTTTGAAGGTTGCCTCACAAATTTTGAGATAGGAGAAGAAGGGGTTGAAGCTTGTGAACTGTACCCTCAAATAAAGTACACTACGGTTGAAGAGTACATGAAACGCTATGTATAG 924 0.4199 MEKSKVLIVGGTGYIGKRMVRASLAQGHETFVLHRPEIGVDIEKVQLLLSFKEQGARLVSGSFQDHQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPARMSHALDPGRVTFDDKMVIRKAVEKAGIPFTYISSNIFAGYFLGGLCQPGFLIPSTESVVLFGDGNVKAIFVDEDDIAMYTIKTIDDPRTLNKTVYIRPPKNILSQREVKLIWKELQKSSISEEQFLSSMGGQSYAQSVAMVHYYHICFEGCLTNFEIGEEGVEACELYPQIKYTTVEEYMKRYV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01053 307 PANTHER PINORESINOL REDUCTASE-RELATED 2 306 - -
Cca06g01053 307 PANTHER BIFUNCTIONAL PINORESINOL-LARICIRESINOL REDUCTASE-LIKE 2 306 - -
Cca06g01053 307 CDD PCBER_SDR_a 5 302 IPR045312 GO:0016491
Cca06g01053 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 265 IPR036291 -
Cca06g01053 307 Gene3D - 4 292 - -
Cca06g01053 307 Pfam NmrA-like family 6 237 IPR008030 -
Cca06g01053 307 Gene3D - 158 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01053 Cca-Chr6 24528411 24530559 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01053 K21568 - gmx:100780465 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01053 06 24528411 24530559 Cca06g01053 06 24528411 24530559 ECH