Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01051 ATGACAAGTGTTTATAAAGCTGGGCTTAGTTATTATTATGTGAGTCAAAGTGAGTATAGAGGAGAGAGTATGGGAAAGAGCAAGGTTCTTGTTGTGGGGGGCACAGGGTATATTGGGAGGAGAATAGTGAAGGCAAGTTTAGAACAAGGTCATGAAACCTTTGTTCTTCAACGTCCAGAGATAGGTCTTGACATTGAGAAGGTGCAGATGCTTCTTTCATTCAAGAAGCAAGGTGCTCATCTTGTGGAGGCTTCTGTCTCTCATCACCAGAGCTTAGTGGAGGCAGTGAAACTAGTGGATGTTGTCATTTGCACCATGTCTGGGGTTCATTTTCGTTCACATAACTTGTTGATGCAGCTCAACCTTGTTCAGGCCATTAAGGCTGCAGGGAATGTTAAGCGTTTCTTGCCTTCAGAATTTGGCATGGACCCAGCACTTATGGGGCATGCACTTGAACCTGGAAGAGTCACATTTGATGAGAAAATGACTGTAAGAAAAGCTATTGAGGATGCCAACATCCCTTTCACTTACGTTTCTGCTAACTGCTTTGCGGGATATTTTGTTGGTAACCTCTCTCAAATGGGGACCCTACTCCCTCCAAGAGACAAGGTTCTTCTCTATGGTGATGCCAATGTCAAAGTTGTTTTCATGGATGAAGATGATGTGGCCACATACACTATTAAGACAATTGATGATCCTCGAACGTTGAACAAGACGGTGTACCTAAGACCACCAGAAAACATTCTCACTCAAAGACAACTAATTGAGAAGTGGGAGAAACTCGTAGGAAAAGAACTAGAGAAGTCAAGCATAAGTGAACAAGACTTTCTTGCTTCCATGAAAGGTTTGGACTATGCTAGCCAAGTGGGAGTGGGGCATTTCTATCATATTTTCTATGAAGGGTGTTTGACAAACTTTGAAATTGGAGAAGGTGGAGAAGAAGCCTCAGAGCTTTATCCAGAAGTGAAGTACACACGCATGGATGAATACTTAAGAGTGTTTGTGTGA 1008 0.4266 MTSVYKAGLSYYYVSQSEYRGESMGKSKVLVVGGTGYIGRRIVKASLEQGHETFVLQRPEIGLDIEKVQMLLSFKKQGAHLVEASVSHHQSLVEAVKLVDVVICTMSGVHFRSHNLLMQLNLVQAIKAAGNVKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEDANIPFTYVSANCFAGYFVGNLSQMGTLLPPRDKVLLYGDANVKVVFMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTQRQLIEKWEKLVGKELEKSSISEQDFLASMKGLDYASQVGVGHFYHIFYEGCLTNFEIGEGGEEASELYPEVKYTRMDEYLRVFV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01051 335 CDD PCBER_SDR_a 28 330 IPR045312 GO:0016491
Cca06g01051 335 Gene3D - 181 331 - -
Cca06g01051 335 PANTHER PINORESINOL REDUCTASE-RELATED 25 332 - -
Cca06g01051 335 PANTHER BIFUNCTIONAL PINORESINOL-LARICIRESINOL REDUCTASE-LIKE 25 332 - -
Cca06g01051 335 Pfam NmrA-like family 29 324 IPR008030 -
Cca06g01051 335 Gene3D - 27 320 - -
Cca06g01051 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 281 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01051 Cca-Chr6 24475971 24479407 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01051 K21568 - gmx:100775382 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01051 06 24475971 24479407 Cca06g01051 06 24475971 24479407 ECH