Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01041 ATGAATCGCCACCACGATCCCAATCCTTTCGACGAAGAAGAAGTGAATCCTTTTTCGAATGGTGGTGCTGCTCCTGCATCAAAATCACGAGTTCCACCAGTAGCATCTGAGCCTCTGGGATTTGGTCAAAGGCATGATGCTACAGTTGATATTCCTTTGGATAATACAAATGACTCTAAGAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAAAAGAGAAGAGGCTGTTTCTAGAGCCGGTGTGCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAAAGGCTGCAATATTTGGCCTTTGCTAGTTGGTTAGGAATTGTTCTCTGTCTAGTTTTTAATGTAGTTGCTGTTATTGTCTGTTGGATTAGAGGCGGCGGTGTTAAAATATTTTTCCTTGCGGTGATATATGCTCTACTTGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGTATTTTGCGTCTTTGCTGCGATTGCGCCTCCAATTGTTTTTCATGGAAAATCATTAACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCATGTTTTGCTTGGAGGCTCTTCTAAGCTTGTGGGTGCTTCAGAAAATATACATGTATTTCCGGGGGCATAAGTGA 810 0.4173 MNRHHDPNPFDEEEVNPFSNGGAAPASKSRVPPVASEPLGFGQRHDATVDIPLDNTNDSKKKGQELAAWEADLKRREKEIKKREEAVSRAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIVFCVFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGMFCLEALLSLWVLQKIYMYFRGHK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01041 269 Coils Coil 66 86 - -
Cca06g01041 269 MobiDBLite consensus disorder prediction 1 64 - -
Cca06g01041 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 269 IPR007273 GO:0015031|GO:0016021
Cca06g01041 269 Pfam SCAMP family 97 267 IPR007273 GO:0015031|GO:0016021
Cca06g01041 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01041 Cca-Chr6 24364384 24371545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01041 1 269 Miscellaneous Gene Families AT1G32050 75.646 7.86e-155 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01041 K19995 - gmx:100806586 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01041 06 24364384 24371545 Cca06g01041 06 24364384 24371545 ECH