Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01027 ATGTTTGGGAGAGGCAAAAATCGGTTGAATCAGTGGTTGCATGAGAAGGGTCCTGATCCGGGGCAAGTGCGACCCGGAACCAGACGATATTGCTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACTTGAATTTCAGTGGGAAACTTAGCCTCGATGCTAGTAATGGAAACACTGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAATTGAGGGTACTCAAGCTGGCAAATGTGCAGTGCCCCCGTGATACACATTTTTGGGTTTACGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATAAGAGGAAACATTTGGGAGAAGGCATCAACAAGATTCAGGCTCCCTCGCTCTCCCGATAACAAAGACCTCCAGATCCAACGCTTGAAGAGGGAGCTGGAACATGCAACAAAGCAGATTGCAAATCTGGAAAAGGAGCGTGTCAGGTTAAAAAAAGAAAGAGACAAGAAAGAAGATCAGCTCAAATTTATATCTTCCAAGAATGAAGAAGAAAATGCTTGTACCAAGTGTTCAACGTCGCAGAGTGTAAACAAGGATTTTGGAACTCTTGCTCCCAACTGTCATAAAATCTCTTCAAAAATTCAAAATGGAGTAACTTCAAGCGACCCAATTGTTGAAACTACTTTTAAAGCTAAGGGAGTTGAAACAGACAAGGTTAGTCATCAAGAAGCTCAAGGTGCTCTAAGTGATGATCTACCTGCGTATCTTGATCTCTCCCAGAAGTTGCTGGCAATTTGGGGATCTCCAACTGACAAAAAGATGGGAAATAGCGTGATATCCAAGTTGCTTGTGGGTTGTCAAAGAGATTTTCATATTCTCTTTGGCTGCTTGAATATGAGTCTACCCTCTGAAATAACAAGAGAATTACTTTCAGACTCAAGCTCTTCAGGAGCAGCTTTGCATCACCTCAAGGATCGTTTTCATACTCCAGAAGCAGCAAAGATGTCAAATCTCTACCTTGCGCTGACAAAGATAGCTGATGGGACAGATGTTTTGGAAACTTTGATTGAACCATTGCTTGATCTCTGTGGTATGGAAAATGTTGTTATTGTCTATAGCTCTCTGTGTGTACTGCATATGCTTCTGAAGCTCCTATTGGAATTGGAAAAGAATGTTGGAAGGAGGGACAATGTCATCATTGAAGGTCTTCACGATGGGAATGACCTTGTCGATTCTGGTGTAAAAGATGGAAATCTCTTCAATGAAGAACTAGTACGCAGAAAAGAGAGCTGGAGCCATCAAAATTCCTTACAACCTCATGTAAATTGGATTTATCTTTTTGAGATAATGCATCAAATTGCCATGAGGATCACAGAGGAAAGAGAGAGAGTGGAGGCGGTATCTATTATGAAGCTGCTTTTCCTGAGAAGTAATGCTTACTTTGAGAGGGATCAGTTTAGCCAGAAAATAGTTTTTAAAACTATTTCAGAATTGCTAAAGAAGAATGCTGGGCTGTCTGTGAAGAAACATGGTCTAAGACTTCTATACCTAGTTCTAAATTGTCCAAAACTCTTGGCTGCCTTCTGCTGTGGTTGCAAAGAGGGGGATGATAGCAGTTCTATGGATGGCAATGAATTTGCTTCTGATATCCAAATTTTTAAGATCATTCTTCAAGGATTGTCTGATTGCGTAGTATCTCATAGAGGTGGTTTGCTGGAGTTGAAAGTAAGCAGAAATGCTATTCTTGTGCTGGCTTTCCTTTCATCATCTGGACAACCGGGTTTTGAAATTCTTGTTAGTCACAGGTTTTCTAGCAGAGGGGTAAACTATCTTATGTTGATTTTGCAATTACTGGTATCAGAGATGGATCTTGAAGTTGGAGCATATGAGCAGCAGCCAGAAATTTTTAGGGAGAGGACATTTTTGATACGGGAGATACTGATATTACTTAACAGACTAGTGTCTAACCCTTCATATTCTGCTACTGTCTTGCGCGATTTAACAACCACTAGGGATATGGCTGGTTTGACAATTGATGTTGCAAGCAGATTATCTCGGAAAGCAAAGAAAAATGGGCAGCAGGACAGCATGGTAAAGCATATACGAGAAACTGAAATCGTTGACCTAGCTCTCCTTTTCAAGAAAAGGGTATTCACATATTTAGGTGATGACTTATCGTGA 2184 0.4075 MFGRGKNRLNQWLHEKGPDPGQVRPGTRRYCYDKESGLWGKEGEKPDRIISSNLNFSGKLSLDASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFRLPRSPDNKDLQIQRLKRELEHATKQIANLEKERVRLKKERDKKEDQLKFISSKNEEENACTKCSTSQSVNKDFGTLAPNCHKISSKIQNGVTSSDPIVETTFKAKGVETDKVSHQEAQGALSDDLPAYLDLSQKLLAIWGSPTDKKMGNSVISKLLVGCQRDFHILFGCLNMSLPSEITRELLSDSSSSGAALHHLKDRFHTPEAAKMSNLYLALTKIADGTDVLETLIEPLLDLCGMENVVIVYSSLCVLHMLLKLLLELEKNVGRRDNVIIEGLHDGNDLVDSGVKDGNLFNEELVRRKESWSHQNSLQPHVNWIYLFEIMHQIAMRITEERERVEAVSIMKLLFLRSNAYFERDQFSQKIVFKTISELLKKNAGLSVKKHGLRLLYLVLNCPKLLAAFCCGCKEGDDSSSMDGNEFASDIQIFKIILQGLSDCVVSHRGGLLELKVSRNAILVLAFLSSSGQPGFEILVSHRFSSRGVNYLMLILQLLVSEMDLEVGAYEQQPEIFRERTFLIREILILLNRLVSNPSYSATVLRDLTTTRDMAGLTIDVASRLSRKAKKNGQQDSMVKHIRETEIVDLALLFKKRVFTYLGDDLS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01027 727 Coils Coil 140 181 - -
Cca06g01027 727 MobiDBLite consensus disorder prediction 1 27 - -
Cca06g01027 727 PANTHER ATR INTERACTING PROTEIN 130 724 IPR044952 GO:0006974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01027 Cca-Chr6 24269103 24282379 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01027 - - gmx:100817091 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01027 06 24269103 24282379 Cca06g01027 06 24269103 24282379 ECH