Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01000 ATGGAAGAAGTGTACCATAATTATAAAAAAGCAGTTATCCAAAGTGGAGATCCCAAGGCAAATGAGACCGTATTGTCGAATATGATTGTTTTATTAGATCGCATATTTTTGGATGTGACGGATCCTTTTGTCTTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTATGTCTTTGGTCAAAATTATATTCGTCCTTTAGTCGATTTCAAAAATTCTTATGTTGGCAACATGCCCGTTTTCATTGAAATGGAAGAGAGACTTAAGCAGGGACATAACATCATTTTGATGTCAAATCACCAAACTGAAGCTGATCCAGCCATCATTGCATTGCTGCTTGAAACACGACTCCCATACATTGCTGAAAACCTGACCTATGTAGCAGGAGATAGAGTTATAACTGATCCTCTGTGCAAACCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCAGCACTTGTAGAGATGAAAAGAACGGCAAATATGCGAAGTTTGAAGGAAATGGCTGTGCTTTTAAGGAGTGGATCACAGATAATCTGGATTGCCCCAAGTGGCGGTAGGGATCGCCCAGATCCCCGCACCGGAGAATGGGTGCCAGCAACCTTTGATACTTCTTCGGTAGATAATATGCGAAGACTTGTTGAACATTCCGGACCACCAGGTCATGTATATCCTTTGGCAATATTGTGCCATGATATAATGCCCCCTCCAATGAAGGTTGAAAAAGAAATTGGGGAGAAAAGAATTATATCCTATCATGGGGCTGGCATATCAGTGGCTCCAGCGATAAGCTTTTCTGAAACCACTGCTACTTGTGAAAATCCAGAAAAGGCTAAGGAGGTATTCTCAAAAGCCCTGTACGATTCTGTGACTCGGCAATATAATGTGCTGAAATCTGCAGTACATGGCAAAAAGGGATTTGAAGCATCAACTCCTGCAGTTTCTTTGTCACAGCCTTGGAAGTAG 999 0.4144 MEEVYHNYKKAVIQSGDPKANETVLSNMIVLLDRIFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNSYVGNMPVFIEMEERLKQGHNIILMSNHQTEADPAIIALLLETRLPYIAENLTYVAGDRVITDPLCKPFSIGRNLICVYSKKHMLDDPALVEMKRTANMRSLKEMAVLLRSGSQIIWIAPSGGRDRPDPRTGEWVPATFDTSSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPMKVEKEIGEKRIISYHGAGISVAPAISFSETTATCENPEKAKEVFSKALYDSVTRQYNVLKSAVHGKKGFEASTPAVSLSQPWK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01000 332 Gene3D - 1 41 IPR038114 -
Cca06g01000 332 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 1 331 - -
Cca06g01000 332 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 1 332 - -
Cca06g01000 332 Gene3D - 42 323 - -
Cca06g01000 332 SMART plsc_2 96 242 IPR002123 GO:0016746
Cca06g01000 332 PIRSF G3POAT 1 332 IPR016222 GO:0004366|GO:0006650
Cca06g01000 332 Pfam Acyltransferase 84 239 IPR002123 GO:0016746
Cca06g01000 332 CDD LPLAT_GPAT 73 308 - -
Cca06g01000 332 Pfam Glycerol-3-phosphate acyltransferase N-terminal 1 43 IPR023083 GO:0004366
Cca06g01000 332 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 1 332 IPR016222 GO:0004366|GO:0006650
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01000 1 331 Acyl Lipid Metabolism Gene Families AT1G32200 68.580 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01000 K00630 - gmx:100789434 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01000 06 23775530 23782068 Cca06g01000 06 23775530 23782068 ECH