Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00968 ATGAGTAGGAAGGAGGTAGTTGCGTTGCCGTGGCGTTTGATAGATGGACTCGCACGCGCACCCCTAACAAAGATAGATAGGTTAGAGACTATTCACCTCACTCTCGTTGAGCGTGAGGTTGGTAGCATTGGGCAAACTACGGCAAGTTTCTTCACGAGGTGGAGAAAGACGCGGCGAGAGCAGAGGAATATTACGGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGCGATTCTGGCGGACCCTGGCGACGGCGAATTGCTTTCGCTGTACGGAACGTTGATTTGGGAAACGCAGAGAGACGAAAAGAGAGCCAAATCTTACTTCGATCAAGCAATTCACGCCGCTCCTCATGATTGCACGGTGCTGGGATCGTACGCGCACTTCATGTGGGAAGCAGGGGAGGATGATGAAGAGAAAGTTAACGGAGGAGTGACGGCGACGGCGACGGAGATGATCGCGTGTAGTTAG 570 0.4105 MSRKEVVALPWRLIDGLARAPLTKIDRLETIHLTLVEREVGSIGQTTASFFTRWRKTRREQRNITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAILADPGDGELLSLYGTLIWETQRDEKRAKSYFDQAIHAAPHDCTVLGSYAHFMWEAGEDDEEKVNGGVTATATEMIACS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00968 189 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 108 174 - -
Cca06g00968 189 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 108 174 - -
Cca06g00968 189 Coils Coil 109 109 - -
Cca06g00968 189 Coils Coil 64 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00968 - - ccaj:109789115 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00968 06 23403648 23414647 Cca06g00968 06 23403648 23414647 ECH